Terriglobus roseus: Terro_2760
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Entry
Terro_2760 CDS
T02140
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit, sigma24
KO
K03092
RNA polymerase sigma-54 factor
Organism
trs
Terriglobus roseus
Pathway
trs02020
Two-component system
trs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
trs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Terro_2760
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Terro_2760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trs03021
]
Terro_2760
Transcription machinery [BR:
trs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Terro_2760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HTH_IclR
HTH_3
HTH_23
Fe_dep_repress
HTH_38
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AFL88996
UniProt:
I3ZIC8
LinkDB
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Position
complement(3305787..3307352)
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AA seq
521 aa
AA seq
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MLLQPKLNLRVSQRQVLTPGLVQMVSVLALNKLELKEMINAEVVENPVLEEIEENAQTYE
EQAGREGDRELSAEQQQTETERVEKDPFDEIDMGEYFQEYLDPGFRVAGPSFEDVDAPSF
ENFLSKPSTLSDHLMWQIGSMSLRPELRAATEVIIGNLEENGYLLVSDEELASHDTRGIA
TPELLAEARAVIQSLDPTGVGAADLRECLLLQVQAGLREVEAAIVRARRHTLQTGEDESA
QDLSPLPALEARRVQLKLACRIIVDHLLLLQKRDLRELMRLLASHADAVTSAIECIRQLD
PRPGLRYNVSETRLIEPDVAFVKRGDDWTVVMNEEDLPALRLNSGYRKMMRQKETEREVK
EYVKERYRSAIQLLRNIEQRKNTIVRTCECIVRRQGDFLERGVDAMRPMMIKEVAEEIGV
HPSTVSRAVANKYVHTPQGVYELRFFFAEGVNGPEGGDLPLPLLKKKVRKLIDDEDPRKP
LTDDALAAELQRQGIQVTRRTVAKYREDMNIPSTHQRRQRQ
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
ttgttgttgcaacccaagttgaatctgcgagtctcacagcgtcaggtgctcacccccggc
ctggtgcagatggtgagcgtcctcgctctgaacaaacttgagttaaaggagatgatcaac
gcagaagtcgttgaaaatcccgtccttgaagagatcgaggagaacgcacagacgtacgaa
gagcaggctgggcgcgagggcgaccgcgagttaagcgcggagcagcaacagaccgaaacc
gaacgcgtcgagaaggatcccttcgacgagatcgacatgggcgaatacttccaggagtac
ctcgatcccggcttccgggttgccggaccttcgttcgaagatgtcgacgcgccgtcgttt
gaaaacttcctttccaagcccagcacgttaagcgatcacctgatgtggcagatcggcagc
atgtccctgcgaccggagttgcgggcggctacggaagtcatcatcggcaaccttgaggag
aatggttacctgctcgtcagcgacgaggaactggcatcgcacgacacgcgcggtatcgcc
acgccggaactgctggcagaggcccgggcggttatccagtctctggatcccactggagta
ggtgcggcagacctgcgtgagtgtcttcttctacaggtgcaggcggggctgcgcgaggta
gaggcagctatcgtccgagcgcggcgccacaccctgcaaaccggcgaggatgagagcgcc
caggatctttcgccattgcctgcccttgaggcgcgtcgcgtgcagttgaagctcgcctgc
cgcatcatcgtcgaccacctgctgctattgcagaaacgcgatctgcgcgaactcatgcgg
ctgctcgcctcccatgcggatgctgtgacctcggccatcgagtgcatccggcagctcgac
ccacggcccggcctgcgctacaacgtctccgagacgcggctcatcgagccggacgtcgcc
ttcgtgaagcgcggagatgattggaccgtcgtgatgaacgaggaagacctgcccgcgctg
cggttgaactccggctatcgcaagatgatgcgtcagaaagagacggagcgcgaagtcaag
gagtacgtcaaggaacgctaccgctccgcgatccagcttttgcgcaacatcgagcagcgc
aagaacaccatcgttcgcacctgcgaatgcatcgtccgccggcagggcgacttcctggaa
cgtggcgtcgatgccatgcggcccatgatgatcaaggaagtcgccgaggagatcggcgtc
catccctctacggtcagccgtgcggtagcgaacaagtacgtccacacgccccagggcgtc
tacgagttacgcttcttcttcgccgaaggcgtcaacggacccgagggtggcgatctgccg
ctgcccctgctgaagaaaaaggtgcgcaagctgatcgacgatgaggatccgcgcaagcct
ttgaccgatgacgcgttggccgcagagctgcaacgccagggcatccaggtcacgcgccgg
acggtagcaaagtaccgcgaggacatgaacatcccaagcacgcaccagcgtcgccagcgt
cagtaa
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