Tenacibaculum retecalamus: PG912_00825
Help
Entry
PG912_00825 CDS
T08858
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PG912_00825 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
trt01007
]
PG912_00825 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trt03016
]
PG912_00825 (aspS)
03029 Mitochondrial biogenesis [BR:
trt03029
]
PG912_00825 (aspS)
Enzymes [BR:
trt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PG912_00825 (aspS)
Amino acid related enzymes [BR:
trt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PG912_00825 (aspS)
Transfer RNA biogenesis [BR:
trt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PG912_00825 (aspS)
Prokaryotic type
Other AARSs
PG912_00825 (aspS)
Mitochondrial biogenesis [BR:
trt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PG912_00825 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
FR47
Motif
Other DBs
NCBI-ProteinID:
WBX71380
LinkDB
All DBs
Position
complement(176558..178312)
Genome browser
AA seq
584 aa
AA seq
DB search
MYRTQTCGELRASHINTEVTLSGWVQKSRDKGFMIWVDLRDRYGITQLIFDEARTSKDLM
EKAKTLGREFVVQVTGTVIERESKNKNIPTGEVELLVTSLEILNEAKTPPFTIEDKTDGG
EDIRMKYRYLDIRRNPVKDSLIFRSKVSMEVRKYLSDQEFIEVETPYLIKSTPEGARDFL
VPSRMNAGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVDQEDILNIFEGLTRHLLKEINNVEVDKFPRMLFDDAMRLYGNDKPDIRFGMEFGELND
VAQQKEFKVFNDAELVVGIAVPGGAKYTRKEIDKLIDWVRRPQVGALGMVYVKCNEDGTF
KSSVDKFYDQEDLAKWAEKTGAKAGDLICILSGNTTKVRAQLSALRMEMAERLGLRDPKV
FAPLWVIDFPLLELDEETGNYHAMHHPFTSPKPGQLALLDTNPGDVKANAYDLVLNGNEI
GGGSIRIHDKETQAIMFKHLGFTEAEAKEQFGFLMDAFEYGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPAALNDLQLSELSIKLDLKE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaacgcaaacttgtggcgaattaagagcctcacacataaatactgaagttacc
ttatctggttgggtacaaaaatctcgtgataaaggttttatgatttgggtagatttacgt
gatcgttacggaattacacagttaatttttgacgaagctcgtacctctaaagatttaatg
gaaaaagccaaaactttaggacgtgaatttgttgttcaagttaccggtactgttattgaa
agagaatcaaaaaataaaaatattcctactggtgaggttgaattattagtaactagttta
gagatattaaacgaagctaaaactccgccttttactattgaagataaaacggatggtggt
gaagatatcagaatgaaatatcgttacttagatattcgtcgtaatcctgtaaaagatagt
ttgatctttagatcgaaagtatctatggaagtacgtaaatatttatctgatcaagaattt
atagaagttgaaacaccttatttaatcaagtcaactccagaaggagcacgtgatttctta
gtgccttcaagaatgaatgcaggtcagttttacgcattaccacaatcacctcaaaccttc
aaacaactattaatggttggtggaatggataaatactttcagattgtaaagtgttttaga
gatgaagatttacgtgccgatcgtcagccagaattcacacaaattgactgtgaaatggct
tttgtagatcaagaagatattttaaatatttttgaagggttaacacgtcatttactaaaa
gaaatcaacaacgttgaagtagataagttcccaagaatgttattcgatgacgcgatgcgt
ttgtatggaaatgacaaaccagacatccgtttcggaatggagtttggcgaattaaatgac
gttgcacagcaaaaagaatttaaagtatttaacgatgctgaattagttgttggtatcgct
gttcctggaggagcaaaatatacaagaaaagaaatagataaattaatcgattgggtacgt
cgtcctcaagtgggagctttaggaatggtgtatgtaaaatgtaacgaagatggtactttt
aaatcatctgtagataaattttacgaccaagaagatttagcaaaatgggcagaaaaaact
ggcgcaaaagctggtgatttaatctgtattttatcaggaaacactactaaagtacgtgcg
caattatctgctttacgtatggaaatggcagagcgtttaggtttaagagatccgaaggta
tttgctccgttatgggtaattgatttcccattattagagctagacgaagaaactggtaat
tatcatgcaatgcaccacccgtttacgtcaccaaaacctggtcagttagcattattagat
acaaatcctggcgatgtaaaagcaaacgcttatgatttggtattaaacggaaatgaaatc
ggtggaggttctattcgtattcatgataaggaaacgcaagctattatgtttaagcattta
ggctttacggaagctgaagctaaagaacaatttggtttcttaatggatgcttttgaatac
ggtgcgccacctcacggaggtttagctttcggattggataggttggttgctattttaggc
ggacaagaaacaattcgtgattttattgcattccctaaaaacaactctggacgtgatgta
atgattgatgctccggctgctttaaacgatctgcaattatcagaattaagtataaaatta
gacttaaaagagtaa
DBGET
integrated database retrieval system
