Tenacibaculum retecalamus: PG912_01095
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Entry
PG912_01095 CDS
T08858
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
trt
Tenacibaculum retecalamus
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PG912_01095 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trt03019
]
PG912_01095 (rnc)
03009 Ribosome biogenesis [BR:
trt03009
]
PG912_01095 (rnc)
03036 Chromosome and associated proteins [BR:
trt03036
]
PG912_01095 (rnc)
Enzymes [BR:
trt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PG912_01095 (rnc)
Messenger RNA biogenesis [BR:
trt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PG912_01095 (rnc)
Ribosome biogenesis [BR:
trt03009
]
Eukaryotic type
90S particles
RNase
PG912_01095 (rnc)
Prokaryotic type
rRNA processing factors
PG912_01095 (rnc)
Chromosome and associated proteins [BR:
trt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PG912_01095 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WBX71425
LinkDB
All DBs
Position
227565..228302
Genome browser
AA seq
245 aa
AA seq
DB search
MNFLRRIVKPQNKEDEVFYYELKELLNFKPITLSHYKKAFTHRSLKLVDEKGHPINYERL
EFLGDAILGSVMASYLYKKVPEGDEGYLTQMRSKVVSRAHLNTLGKDLDLIRFIKSNISQ
ANISNNIYGNIFEALIGAIYLDRGYNYCNQFIYDQVVLPYVDIERLEGKISSYKGYVIEW
CQKNKKKYKFESYEDSGNQNKKHFSVRVSIDGNIIGKGRATSKKKAEEIAAKRVYFAMQS
QMENS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcttcgtagaatcgttaagccccaaaacaaagaggatgaagttttttactac
gaattaaaagagctgcttaattttaaaccaataacactttcgcattataagaaagcgttt
acacacaggtctttaaaattagttgatgaaaaaggacaccctattaattacgaacggtta
gagtttttgggtgatgcaattttaggttcagtaatggcctcttatttgtataaaaaagta
ccggaaggagacgaaggatacttaactcaaatgcgatcgaaagtagtaagtagagcacac
ttaaatactttaggaaaagatttagatttaattcgattcataaaaagtaatatctctcaa
gctaatattagcaataatatttacggtaatatttttgaagctttaattggtgctatttat
ttagatagaggttacaattattgcaatcaatttatttacgatcaagtagtattaccttat
gtagatattgaaagattagaaggtaaaatatctagctataaaggatatgttattgagtgg
tgtcaaaagaacaagaaaaagtataagttcgaatcttacgaagattctggaaatcaaaat
aagaaacattttagtgttcgagttagtattgacggaaatattataggtaagggtagagcc
acttcaaagaaaaaagcagaagaaatagctgcgaaaagagtgtattttgcaatgcaaagt
caaatggaaaactcttaa
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