Tenacibaculum retecalamus: PG912_01885
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Entry
PG912_01885 CDS
T08858
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
trt
Tenacibaculum retecalamus
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trt03016
]
PG912_01885 (truB)
Enzymes [BR:
trt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PG912_01885 (truB)
Transfer RNA biogenesis [BR:
trt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PG912_01885 (truB)
Prokaryotic type
PG912_01885 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
DUF5381
Motif
Other DBs
NCBI-ProteinID:
WBX71567
LinkDB
All DBs
Position
complement(386697..387392)
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AA seq
231 aa
AA seq
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MKTEEDYKNGQVLLIDKPLEWTSFQVVNKLRWEIRQRFNIKKIKVGHAGTLDPLATGLLI
LCTGKKTKIIDTYQGQIKEYTGTITLGGTTPSYDLETAVNETFSTEHITEEFIHETTKQF
TGVIQQKPPIFSAIKKEGVRLYELARKGETTEIKTREVTIPLFEITNITGNNLDFRVICS
KGTYIRSLAYDFGIALNSGAHLSKLRRTKIGDFHVDNAVSVDAFIKSLETE
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggaagaagattacaaaaacggacaagttttattgattgataaacctttagaa
tggacttcttttcaggtggttaataaactgcgttgggaaataagacaacgtttcaatatc
aaaaaaataaaagttgggcatgctggaactttagatccattggcaacaggtttattgata
ctttgtacaggtaaaaaaactaaaataattgatacgtatcaaggtcaaataaaagaatac
acaggtactattactttaggaggaacaacacctagttacgatttagaaacagcggtaaac
gaaactttttctacagaacatattactgaagaatttattcatgaaacgaccaaacaattt
acgggagtcattcagcaaaaaccacctattttttcagccataaaaaaagaaggtgtgcgt
ttatatgaactagctagaaaaggtgaaactaccgaaataaaaacaagagaagttaccatt
cctttatttgaaataacaaacattacaggtaacaatcttgattttagagttatttgtagt
aaaggaacatacattcgttctttggcttatgattttggaattgctttaaattctggtgct
catttatcaaaattaagacgaactaaaattggtgattttcatgttgataatgcagtaagc
gtagatgcttttataaaatctttagaaacagaatag
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