Tenacibaculum retecalamus: PG912_02430
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Entry
PG912_02430 CDS
T08858
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt00541
Biosynthesis of various nucleotide sugars
trt01100
Metabolic pathways
trt01250
Biosynthesis of nucleotide sugars
Module
trt_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PG912_02430 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
trt01005
]
PG912_02430 (rfaD)
Enzymes [BR:
trt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PG912_02430 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
trt01005
]
Core region
PG912_02430 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
Ldh_1_N
FCSD_central
Motif
Other DBs
NCBI-ProteinID:
WBX71666
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All DBs
Position
complement(491204..492199)
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AA seq
331 aa
AA seq
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MNTNFNNKTILITGGAGFIGSNIAFYLQENYPDSKIIIFDIFRNEEIFSSGSLKSYGHYK
NLIGFKGIIICGDITNDQDLNKLKNYKLDYIFHQAAISDTRVYDQELIMKTNVNSFYKLL
EIAKNNNSTIVYASSAATYGSSPSPQKIGDDSPENPYAFSKYCMDQIAYKYLKEHSEMHI
IGLKFFNVYGEKEYFKEKSSSMILQIGHQILAGKSPRLFFDSDKIMRDFIYIKDVVEANI
LACFAKKKGVYNVGTGINRSFYDIVSILQQELNTDLNIEYFKNPYTGYQMNTKADISLTQ
HSLKFKPSYTLEKGIKEYTPYIKQTFNWNNK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaattttaataataaaactattttaataactggtggtgcagggtttattgga
tccaatatcgctttttatttacaagaaaattatcctgatagcaaaattataatttttgat
attttcagaaacgaagaaatttttagttctggtagtttaaaaagttatggtcattataaa
aacttaataggtttcaaaggaattataatttgtggagatattactaatgatcaagattta
aataaacttaaaaattacaaattagattatatttttcatcaagctgctatttctgacact
cgtgtttatgatcaagaattaatcatgaaaacaaatgttaatagtttttataaactttta
gaaattgcaaagaataacaattcaactatagtttatgctagttctgctgcaacatatggt
tcaagtccttcccctcaaaaaattggtgacgactctcctgaaaacccttatgctttttct
aaatactgcatggatcaaattgcttataaatatttaaaagagcactctgaaatgcatatt
attgggcttaagtttttcaatgtctatggtgaaaaagaatactttaaagaaaagagttct
tctatgatacttcaaattggacatcaaattttagcaggtaaatcacctcgtttatttttt
gactcagataaaataatgcgagattttatttacattaaagatgttgttgaagctaatata
ttagcctgctttgcaaaaaagaaaggagtatacaatgttggtacaggtattaatcgtagt
ttttatgatattgtaagtatattacaacaagaattaaatacagatttaaatatagaatat
tttaagaacccttacacaggttatcaaatgaatactaaagcggatattagtttaactcaa
cattctttaaaatttaaacctagttatactctagaaaaaggtattaaagaatatacccct
tatataaaacaaacatttaattggaataataaataa
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