KEGG   Tenacibaculum retecalamus: PG912_02610
Entry
PG912_02610       CDS       T08858                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
trt  Tenacibaculum retecalamus
Pathway
trt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:trt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PG912_02610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trt03019]
    PG912_02610
   03016 Transfer RNA biogenesis [BR:trt03016]
    PG912_02610
Enzymes [BR:trt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     PG912_02610
Messenger RNA biogenesis [BR:trt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PG912_02610
Transfer RNA biogenesis [BR:trt03016]
 Prokaryotic type
  tRNA degradation factors
   PG912_02610
SSDB
Motif
Pfam: RNase_PH RNase_PH_C KH_1 PNPase S1 KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: WBX71700
LinkDB
Position
complement(528142..530376)
AA seq 744 aa
MIPKVFREVIDLGDGRTISLETGKLAKQAHGSVVVQMGKAMLLCTVVSSYKAGTVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSEVQVMIQLMS
HDEDVMPDALAGLAASAAIQLSDFPFECPISEARVARVNGEFVINPNRAQLAESDIDMMI
GASADSVMMVEGEMDEISEEEMADAIKFAHESIKIQCAAQVRLAEAFGKKETREYEGERE
DEEVAAKINDLAYDKCYAIAKKGTSKAERSAAFAEVKEEVKAAFTEEELADYGDLVGKYF
NKSQKAAVRELTLAEGLRLDGRKTDEIRPIWCEVDYLPSTHGSSIFTRGETQALATVTLG
TSRDAMKIDMPSYEGEENFYLHYNFPPFCTGEARPLRGTSRREVGHGNLAQRGLKGMIPD
DCPYTVRVVSEVLESNGSSSMATVCAGTMALMDAGVKMTRPVSGIAMGLISDGDRYAVLS
DILGDEDHLGDMDFKVTGTSEGITACQMDIKVKGLGYEILVNALKQARDGRLHILEKLTD
TIADANEEVKEHAPKMINRRIPNDMIGAFIGSGGKHIQELQKETGTTIVITEDAVTEEGI
IEILGTDPAGIEQVITRIESMLFKPQVGSAYQVKVIKMLDFGAVVEYMDAPGNEVLLHVS
ELAWERTENVTDVVNMGDIFDVKYFGQDPRTRKEKVSRKALLPKPEGFVARPPRDDKRSG
GRDNRSRDNRGRDDRKPREPRKEE
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgattccaaaagtatttagagaggtcattgaccttggagatggaagaaccatctcatta
gaaacgggtaagttagcaaaacaagcccatggttcggttgttgttcaaatgggaaaagca
atgttgttatgtactgtagtatctagctacaaagcaggaacagttgatttcttaccatta
acggtagattatagagagaagtttgcagctgcaggtcgttatccaggtggtttctttaaa
agagaagctagaccaagtgatggtgaagtattaacaatgcgtcttgtagaccgtgtttta
cgtccattattcccaaaagattaccattcagaagtacaggtaatgatccaattaatgtct
catgatgaagatgttatgccagatgcattagcaggtttagcagcatcagcagctattcaa
ttatcagatttccctttcgaatgcccaatttctgaagcacgtgttgctagagtaaatgga
gaattcgtaattaacccaaacagagcacaattagcggaatctgacatcgatatgatgatt
ggagcatcagctgattctgtaatgatggttgaaggtgaaatggatgagatttctgaagaa
gaaatggcagatgcaattaaatttgctcatgaatctattaagattcagtgtgctgctcag
gttcgtttagctgaagctttcggaaagaaagaaacaagagaatacgaaggagaaagagaa
gacgaagaagttgctgcaaaaataaatgaccttgcttacgataagtgttatgctatcgct
aaaaaaggaacatctaaggcagaacgttctgctgcttttgctgaagtaaaagaagaagta
aaagctgcttttactgaagaagaattagcagattatggtgatttagttgggaaatatttc
aataaatctcaaaaagctgctgttcgtgaattaactttagctgaaggattacgtttagac
ggtcgtaagactgatgaaattagaccaatttggtgtgaagtagactacttaccatcaaca
catggttcatcaatctttactcgtggagaaacacaagcattagcaacagtaactttagga
acatctagagatgcaatgaaaatagatatgccatcttacgaaggtgaagaaaatttctat
ttacactataacttccctcctttttgtacaggtgaagcaagaccattaagaggaacatct
cgtagagaagttggtcatggtaacttagcgcaacgtggattaaaaggaatgattccagac
gattgtccttatacagtaagagttgtatctgaagtattagaatctaacggttcttcttct
atggctacagtttgtgctggtacaatggcattaatggacgcaggtgttaaaatgacaaga
ccagtttctggtattgctatgggattaatttctgatggtgatcgttacgcagttttatct
gatattttaggggatgaagatcacttaggtgatatggactttaaagtaactggtacttct
gaaggaattactgcatgtcagatggatattaaagtaaaaggattaggttacgagatttta
gtgaatgcattaaaacaagctcgtgacggtcgtttacatattttagaaaaattaacagat
acgattgctgatgcaaacgaagaagttaaagagcatgctcctaaaatgattaacagacgt
attcctaatgatatgattggtgcatttattggatcaggaggtaaacatattcaagaatta
cagaaagaaacaggaactacaattgtaattactgaagatgctgtaactgaagaaggaatt
attgaaatcttaggaactgatcctgctggaatagaacaagttattactcgtattgagtct
atgctttttaaaccacaagtaggtagtgcttaccaggttaaagtaattaaaatgttagat
tttggtgcggttgtagaatatatggatgctccaggaaacgaagttttattacacgttagt
gaattagcttgggaacgtacagaaaatgttaccgatgtagtaaatatgggtgatattttt
gacgtgaagtattttggtcaagatccaagaactcgtaaagaaaaagtttctcgtaaagca
ttgttaccaaaaccagaaggttttgttgcaagaccaccaagagatgacaaacgttctgga
gggcgtgataacagaagcagagataatcgtggacgtgatgacagaaaaccaagagaacct
agaaaagaagaataa

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