KEGG   Tenacibaculum retecalamus: PG912_03100
Entry
PG912_03100       CDS       T08858                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
trt  Tenacibaculum retecalamus
Pathway
trt00010  Glycolysis / Gluconeogenesis
trt00020  Citrate cycle (TCA cycle)
trt00260  Glycine, serine and threonine metabolism
trt00280  Valine, leucine and isoleucine degradation
trt00310  Lysine degradation
trt00380  Tryptophan metabolism
trt00620  Pyruvate metabolism
trt00630  Glyoxylate and dicarboxylate metabolism
trt00640  Propanoate metabolism
trt00670  One carbon pool by folate
trt00785  Lipoic acid metabolism
trt01100  Metabolic pathways
trt01110  Biosynthesis of secondary metabolites
trt01120  Microbial metabolism in diverse environments
trt01200  Carbon metabolism
trt01210  2-Oxocarboxylic acid metabolism
trt01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:trt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PG912_03100 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PG912_03100 (lpdA)
   00620 Pyruvate metabolism
    PG912_03100 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PG912_03100 (lpdA)
   00640 Propanoate metabolism
    PG912_03100 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PG912_03100 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PG912_03100 (lpdA)
   00310 Lysine degradation
    PG912_03100 (lpdA)
   00380 Tryptophan metabolism
    PG912_03100 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PG912_03100 (lpdA)
   00670 One carbon pool by folate
    PG912_03100 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:trt04147]
    PG912_03100 (lpdA)
Enzymes [BR:trt01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PG912_03100 (lpdA)
Exosome [BR:trt04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PG912_03100 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like FAD_oxidored NAD_binding_8 FAD_binding_2 FAD_binding_3 AlaDh_PNT_C GIDA Lys_Orn_oxgnase DAO Thi4 3HCDH_N MSSS XdhC_C 2-Hacid_dh_C NAD_binding_7 SCVP
Other DBs
NCBI-ProteinID: WBX71787
LinkDB
Position
complement(630932..632332)
AA seq 466 aa
MKYDLIVIGSGPGGYIAAIRAAQLGSKVAIIEKYSTLGGTCLNVGCIPSKALLDSSHHYY
DAVHHFEEHGISVEKPSFDFGKMVDRKAKVVETTTGGIKYLMDKNDITVHEGLGSFEDAT
HVKVTKNDGTSEVIEGTNIIIATGSKPSTLPFISLDKERVITSTEALKLKEVPKHLLVIG
GGVIGLELGSVYKRLGADVTVIEYAPKITPTMDADVSKELQKVLKKQGMKFNTSHGVTSV
ERNGDEVVVKATNKKGEEVTFNGDYCLVAVGRKAFTEGLGLEKAGVKLTDRGMVDVNDHL
QTSVSNIFAIGDVVRGAMLAHKAEEEGVVVAEFLAGQKPHIDYNLIPGIVYTWPEVAAVG
KTEQELKDAGVAYKAGKFSMRALGRSRASGDTDGFVKVLADKNTDEVLGVHMVGARVADL
IMEAAVAMEFRASAEDLARICHGHPTYSEAVKEAAKAAWDGKPLNA
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgaaatacgatttaatcgttattggttctggtccaggtggatatattgctgcaattaga
gccgctcaattaggatctaaagtagcaattatcgaaaaatattcaactttaggtggtacc
tgtttaaatgtaggatgtattccttctaaagctttattagattcttctcatcattattac
gatgctgtgcatcattttgaagaacatggaatttcggttgaaaagccttctttcgatttt
ggaaaaatggtagaccgcaaagctaaagttgtagaaactacaacaggaggaattaaatat
ttaatggacaagaatgatattactgttcatgaaggtttaggttcttttgaagatgcaaca
cacgtaaaagttactaaaaacgatgggacatcagaagtaattgaaggaacaaatattatt
atagcaacaggttctaaaccatctacattaccatttatttctttagataaagaacgcgtt
ataacatcaaccgaagctttaaaacttaaagaagtaccaaaacacttattagtaattggt
ggtggagtaatcggtttagagttaggttctgtttacaagcgtttaggtgctgatgtaact
gtaattgaatatgctccaaaaatcactcctaccatggatgctgatgtttctaaagaactt
caaaaagttttaaagaaacaaggtatgaagtttaacacaagtcacggtgttacttcggta
gaaagaaacggagacgaagttgttgtaaaagcaaccaataaaaaaggagaagaagttact
tttaacggagactattgtttagttgctgttggtcgtaaagcatttactgaaggtttagga
ttagagaaagctggcgttaagcttactgatagaggaatggttgacgtaaacgatcattta
caaactagtgtttctaatatttttgctattggtgatgttgttcgcggagcaatgttagca
cataaagctgaagaagaaggtgttgttgttgctgaatttttagcaggacaaaaaccacat
atcgattataatttaattcctggtattgtgtatacatggccagaagttgctgctgttggt
aaaacagaacaagaattaaaagatgctggtgttgcttataaagctggtaaattttctatg
cgtgctttaggaagatctagagctagtggagatactgacggatttgtaaaagtattagct
gataaaaatacggatgaagtattaggagttcatatggttggtgcacgtgttgccgattta
attatggaagctgccgtagcaatggaatttagagcttctgctgaagatttagcaagaata
tgtcatggacatccaacatactcagaggctgttaaagaagctgcaaaagctgcttgggac
ggaaaacctttaaatgcttaa

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