Tenacibaculum retecalamus: PG912_04055
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Entry
PG912_04055 CDS
T08858
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
trt
Tenacibaculum retecalamus
Pathway
trt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PG912_04055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trt02000
]
PG912_04055
Transporters [BR:
trt02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PG912_04055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SHE3
Cds6_C
Motif
Other DBs
NCBI-ProteinID:
WBX71956
LinkDB
All DBs
Position
818240..819874
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AA seq
544 aa
AA seq
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MQINHIIKIKEKTSKFLILIVLFISFYSCTKEASSFSETQVFRYNEHSNITSLDPVFAKD
QRNIWAVNQLFNGLVQLDDSLHVQPDIAKNWAISEDGKTYKFTLRNDVEFHKHSLFGKDS
TRNVTAHDFEYSFNRLLHKNVASPGGWVLQNVADFKAENDSLFTINLKQPFPPFLGLLAM
KYCSVVPKEAITYFGNSFRANPIGTGPFKFKLWVENTKLVLRKNPLFYEKDIAGNSLPYL
EAVAITFLPDKQSEFLQFIQGNLDFMKSLDASYKDDILNTNGTLKEKYVGKIKMETGAYL
NTEYLGIYLDGENEHPTKSKLIRQAINYGFDRVKMIKFLRNGIGTPATSGFIPKGLPSFN
NQKGYSYQPEKAAALVSEYIKVTGNENPEITITTNGNYLDLCEFIQRELQNIGLQTKVDV
IPPSTLRQGKSSGKLPVFRASWIADYPDAENYVSLFYSKNFTPNGPNYTHFKNEKFDELY
ENSIKEVDVKKRYELYQQMDSIIIEEAPIVPLYYDEVIRFSQKNIQGLGINPIDLLNLKR
VKKN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
ttgcagataaatcatattataaaaataaaagaaaaaacaagtaaatttcttattttaata
gtcctttttataagtttttattcttgtactaaagaagccagttctttttcagaaactcag
gtttttcgttataacgaacactctaatattacctctcttgatcctgtattcgcaaaagat
caacgtaatatttgggcggtaaatcaactgtttaatggtttggttcagttagatgatagt
ttgcatgtacaacccgacattgctaaaaactgggcgatttctgaagacggaaaaacatat
aagtttactttaagaaatgatgtagaatttcataaacattcgctattcggaaaagattca
acaagaaacgtaacagctcatgactttgaatattcatttaatagattattacataaaaat
gtagcctctccaggaggttgggttttgcagaatgtagcagattttaaagcagaaaacgat
tcgctttttaccatcaatttaaaacagccttttccgccttttttagggttattggcaatg
aaatactgttcggtagttccgaaagaagctataacttattttggtaattcttttagagca
aatccaataggtacaggtccttttaaatttaaattatgggtagaaaatacaaaattagta
ttacgtaaaaatccgttgttttatgaaaaagatatagcaggaaattcgttaccatattta
gaagctgtcgcaattacttttttacctgataagcagagtgaatttttgcaatttatacaa
ggaaacctcgattttatgaaaagtttagatgcttcttataaagatgatattttaaataca
aacggaactttaaaagagaaatatgttggtaaaattaagatggaaaccggtgcatatttg
aatactgagtatttagggatttatttagatggagaaaatgaacatccaacgaaatcaaaa
ttaataagacaagctataaattacggatttgatcgtgtaaaaatgattaaattcttacga
aacggaataggaacacctgctacaagtggatttataccaaaaggattaccgtcatttaat
aatcaaaaaggatattcttatcagccagaaaaagcggctgctttggtttcggaatatata
aaggtaacaggaaatgaaaatccagaaattacaattactacgaatggtaattatttagat
ttatgtgagtttattcagcgtgaattgcaaaatattggattacaaactaaagtagatgta
attccgccctcaactttacgacaaggaaaatcgagtggaaagctacctgtttttagagca
agttggattgctgattatcctgatgcagaaaattatgtctcgttattttatagtaaaaat
tttacaccaaacggaccaaattatacacattttaagaatgaaaaatttgacgagctatac
gagaactcaataaaggaagtcgacgttaaaaagcgttatgaattatatcagcaaatggat
agtattattatagaggaagctccgattgttccgttatattacgatgaagtaattcgtttt
agtcaaaaaaacattcaaggattgggaataaatcctattgatttactgaatttgaagcgt
gttaaaaagaactaa
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