Tenacibaculum retecalamus: PG912_04125
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Entry
PG912_04125 CDS
T08858
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt00920
Sulfur metabolism
trt01100
Metabolic pathways
trt01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
PG912_04125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trt03400
]
PG912_04125
Enzymes [BR:
trt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
PG912_04125
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
PG912_04125
DNA repair and recombination proteins [BR:
trt03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
PG912_04125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
DUF5700
Motif
Other DBs
NCBI-ProteinID:
WBX71970
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All DBs
Position
831384..832412
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AA seq
342 aa
AA seq
DB search
MILKHFTELKEFLSQPKKIVIIGHRNPDGDAVGSTLGLKHYLDKKGHTAQVVMPNEYPDF
LHWIPGSDTVYRFDHQNKQSVRSLSNSEIVFLLDFNALHRVGGDMQNTLEQYGNDFALID
HHQQPDDFTYMYSDTIMSSTCQMVYNFIEMMGDVDLIDKNIATCLYTGIMTDTGSFRFRS
TTSTTHRIIADLIDKGAENDRIHSNVLDANSYSRLLLLGQALSNMKLLPAYKTAFITLSE
EEKKKFNYEKGDTEGVVNYALSLKGIVFAAIFIEDKEQGIIKMSLRSKGKFSVNQFARNH
FSGGGHDNAAGGKSLESMEDTIATFTALLPNYQKELAASYEV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgattttaaaacactttacagaactcaaagaatttttatcacaacctaaaaaaattgtg
atcattggtcatagaaatccagatggtgatgccgttggctctactttaggattaaaacat
tatttagataaaaaaggacacactgctcaggtggttatgccgaatgaatacccagatttt
ttacattggattcctggttcagataccgtatatcgttttgatcaccaaaataagcaaagt
gttcggtctttaagtaattcagaaattgtatttcttttagattttaatgcattacacaga
gtaggaggtgatatgcagaatactttagagcaatatgggaatgattttgcattgatagat
catcatcaacaaccagacgattttacctatatgtattctgatactataatgtcatcaact
tgtcaaatggtttataatttcatcgaaatgatgggtgatgttgatttgattgataaaaac
atagctacctgtttatatacaggtattatgaccgatacaggttcgtttcgttttagatct
accacaagtacaacacaccgtattattgcagatttaatagataaaggagctgaaaacgat
agaatacacagtaatgtgcttgatgcaaattcatacagtcgacttttattgttggggcaa
gcattaagtaatatgaagttgttgccagcatataaaacagcgtttataactttatccgaa
gaagaaaagaaaaagtttaattacgaaaaaggagatacagaaggggttgtaaattacgcg
ctttctttaaagggaattgtatttgcggctatttttattgaagataaagagcaaggaatc
attaaaatgtcacttcgtagtaaagggaagttttctgtaaatcagtttgctagaaaccat
tttagtggtggcggacacgacaatgctgctggtggtaaaagtttagagtcgatggaagat
acgattgcaacatttacagcgttattacctaattatcaaaaagaattagcagcgtcttat
gaagtttaa
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