Tenacibaculum retecalamus: PG912_04250
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Entry
PG912_04250 CDS
T08858
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
trt
Tenacibaculum retecalamus
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
trt03110
]
PG912_04250
Chaperones and folding catalysts [BR:
trt03110
]
Heat shock proteins
HSP100
PG912_04250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
Sigma54_activat
AAA_22
AAA_16
nSTAND3
AAA_18
AAA_14
TniB
UVR
IstB_IS21
AAA_7
AAA_3
RuvB_N
RNA_helicase
Zeta_toxin
ABC_tran
Torsin
DUF815
DUF87
DNA_pol3_delta2
Bud13
Motif
Other DBs
NCBI-ProteinID:
WBX71992
LinkDB
All DBs
Position
complement(853651..856203)
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AA seq
850 aa
AA seq
DB search
MDDNFSPQVRDVITFSKEEALRLGHDFIGTEHLLLGLIRKGDGKAIEILTTFDVDLDLMR
NKLEKLNPTTPSIASIEKKSLHLTRQAEKAIKTTFLEAKLYQSSSIDTAHLLLCILRNEN
DPATKLLQKYDVGYEEAKALYKELHMEDTFPSPTAETPSDDEFTDDKSNPFGQQTPKGKQ
TKKSKTPVLDNFGRDLTLLAVSGKLDPVVGRIKEIERVSQILSRRKKNNPMLIGEPGVGK
SAIAEGLALRIVERKVSRILFDKRIVSLDLASLVAGTKYRGQFEERMKALMNELEKNDDI
ILFIDEIHTIVGAGGATGSLDASNMLKPALARGEIQCIGATTLDEFRTNIEKDGALERRF
QKVIVEPTTVEETVQILHNIKGKYEAHHQVSFTDEAIDACVKLTNRYMTDRFLPDKAIDA
LDEAGSRIHITNIVVPQQILELEAKLEEIREQKTKAVSGQKYEEAAKLRDDEKNMETALA
SAENQWEEDAKLNREVVTEDNVAEVVSMMTGIPVNRVAEAESNRLADLPNMIKGKVIGQD
EAVTKVVKAIQRNRVGLKDPNKPIGSFIFLGSTGVGKTQLAKVLARELFDSSDSLIRIDM
SEYMEKFAISRLIGAPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNMLLQVL
DDGHITDSLGRKIDFRNTIIIMTSNIGARKVKEFGSGVGFGTSSKKEQEDSHVKSIIEGA
LKKSFAPEFLNRIDDVIIFNSLEREDIHKIIDIELEKLLNRIADLGYKLTLSEKAKDYIA
DKGFDKKYGARPLKRAIQKYIEDALAEEIVNSKLEEGDTIFMDLDDKDNKLIIKIEKGEK
PEESRTEIDQ
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggacgataatttttcaccacaagttagagatgtaattactttcagtaaagaagaagcc
ttacgattaggacacgattttattggaacagaacatcttttgttaggtttgattagaaaa
ggagacggaaaagccattgaaatattaactacttttgatgtagatttagatttgatgcgt
aataaattagaaaaactaaatccgactaccccatcaatagcaagcatcgaaaaaaagagt
ttgcaccttacaagacaagcagaaaaagcaataaaaacaacatttttagaagccaaatta
taccaaagtagttcaattgacactgctcatttattattatgtattttacgtaatgaaaat
gaccctgcaacaaaactgcttcagaaatatgatgtaggctacgaagaagcaaaagcactt
tacaaagaacttcatatggaagacacctttccctctcctactgcagaaactccttctgat
gatgagtttacagatgacaaatcgaatcctttcgggcagcaaacacccaaaggaaaacaa
actaaaaaatctaaaactccggtattagataatttcggacgcgatttaacattactagca
gtttctggtaaactagatcctgttgtaggtcgaataaaagagattgaacgtgtttctcaa
attttaagtagacgtaaaaaaaacaatccaatgttaattggagaacctggtgtgggtaaa
tctgccattgccgaaggtttagccttaagaattgtagaacgaaaagtatctcgtatttta
tttgataaaagaattgtttctttagatttagccagcttagttgccggaacaaaatacaga
ggtcagtttgaagaacgcatgaaagctctaatgaacgaattagagaagaatgacgacatt
attttatttattgatgaaattcacacaattgttggtgcaggtggtgctacaggctcttta
gatgcctctaacatgcttaaaccagctttagctcgtggagaaattcaatgtataggagca
actactttagatgaatttagaacaaatattgaaaaagatggcgccttagaacgtcgtttt
caaaaagtaattgtagaaccaacaaccgttgaagaaacagtacaaattttacacaatatt
aaaggtaaatacgaagcacaccatcaagtatcatttactgatgaagctattgatgcctgt
gtaaaattaacaaatcgttatatgacagatcgctttttaccagacaaagctattgatgct
ttggatgaggctggatctagaattcatattacaaacattgttgttccacagcaaattcta
gaattagaagctaaattagaagaaattcgcgaacaaaaaacaaaagctgtaagcggtcag
aaatacgaagaagcagcaaagcttcgtgatgacgaaaaaaatatggaaaccgcattagca
tccgcagaaaaccagtgggaagaagatgctaaattaaacagagaagttgttaccgaagat
aatgttgctgaagttgtttctatgatgacaggaatacctgtaaacagagttgcagaggca
gaaagtaatcgtttagctgatttaccaaatatgattaaaggtaaagtcatcggacaagac
gaagctgttaccaaagtcgtaaaagcaatacaacgtaatcgtgtaggtttaaaagaccct
aataaaccgattggttcttttattttcttaggatcaacaggagttggaaaaacacaatta
gcaaaagtattggcacgcgagttattcgactctagcgattccttaattagaatcgatatg
agcgaatacatggaaaaatttgctatttctcgtttaattggtgcgcctcccggatatgta
ggttatgaggaaggtggtcagttaactgaaaaagttagaagaaaaccatattctgtaatt
cttttagatgaaattgaaaaagcacatccagatgtttttaacatgttattacaagtttta
gatgatggacacatcaccgacagtcttggtagaaaaatagattttagaaacaccattatt
attatgacttctaacataggagctcgtaaagtaaaagaatttggctcgggagttggtttt
ggaacttcatcgaaaaaagaacaagaagactcacatgtaaagagtattattgaaggtgct
ttaaaaaaatcatttgccccagaatttttaaatcgtattgatgatgttataattttcaac
tctttagaaagagaagacattcataaaattatcgatattgaattagaaaaactattaaat
cgtattgctgatttaggctataagctaacattaagcgaaaaagcaaaagactacatagca
gacaaaggttttgataaaaaatatggtgcaagacctttaaagagagcaattcaaaaatat
attgaagatgctttagctgaagaaattgtaaactcaaaattagaagaaggagatactatt
tttatggatttagatgataaagacaataaactgatcatcaaaatagaaaaaggagaaaaa
cctgaagaatctcgtacagaaatagatcaataa
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