Tenacibaculum retecalamus: PG912_04255
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Entry
PG912_04255 CDS
T08858
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
trt
Tenacibaculum retecalamus
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trt03032
]
PG912_04255 (gyrA)
03400 DNA repair and recombination proteins [BR:
trt03400
]
PG912_04255 (gyrA)
Enzymes [BR:
trt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PG912_04255 (gyrA)
DNA replication proteins [BR:
trt03032
]
Prokaryotic type
DNA Topoisomerases
PG912_04255 (gyrA)
DNA repair and recombination proteins [BR:
trt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PG912_04255 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TBCC_N
Motif
Other DBs
NCBI-ProteinID:
WBX71993
LinkDB
All DBs
Position
856512..859013
Genome browser
AA seq
833 aa
AA seq
DB search
MADGEKLIPINIEEQMKAAYIDYSMSVIVSRALPDVRDGLKPVHRRVLFGMHELGIKATG
SYKKSARIVGEVLGKYHPHGDTSVYDSMVRMAQSWSQRYMMVDGQGNFGSVDGDSPAAMR
YTEVRMQKISEDMLADIEKDTVDHRLNFDDTLQEPTVLPTRIPNLLVNGASGIAVGMATN
MAPHNLTEVVNGTIAYIENRDIEIDELMQHIKAPDFPTGGTIYGYEGVKDAFHTGRGRIV
MRAKTSFEEVKGRECIIVTEIPYQVNKAEMIKKTAELVNDKKLEGIANIRDESDRNGMRI
VYILKRDAIPNIVLNKLFKYTQLQTSFSVNNIALVNGRPEQLNLKQLIHYFVEHRHEVVV
RRTEFELKKAEARAHILEGLIIASDNIDEVIKIIRASKNGDEAREKLIERFELTEIQAKA
IVEMRLRQLTGLEQDKLRAEFDEIMLTITDLKDILANEPRRYQIITDELTLVRDKYGDER
RSEIHYAGGDMRIEDMIPNSKVVVTISHAGYVKRTNLDEYKVQNRGGRGQKGATTRNEDF
LEHLFVGTNHQYMMFFTQKGKVFWMRVYEIPEGGKNTKGRAMQNLINIESDDKVKAFLVT
QDLKDEEYIKNHYVIMATKKGQVKKTPLEQYSRPRTNGINAITIKEGDELLEAKLTTGDS
QVMLALKSGKSIRFEEAKTRPMGRTASGVRGITLQHDKDEVIGMIAVNDMDSNILVVSEK
GYGKRSKLEDYRVTNRGGKGVKTLNISEKTGELVAIKNVDDSNDLMIINKSGLTIRMAVE
DLRVMGRATQGVRLINIKDSDSIAAVAKVMREEDEEEDGTEIENEDITNEEQE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggcgaaaagttgattcctatcaacattgaagagcaaatgaaagcggcgtat
atcgattattcaatgtcggttatcgtatcaagagcattaccagatgtaagagatggttta
aaaccagttcacagaagagttttgtttggtatgcatgagcttggaattaaagcaacaggg
tcatataaaaagtcggcaagaattgtaggggaagtactaggtaagtatcacccgcatggt
gatacctctgtatatgattctatggtgcgtatggcgcaaagttggagtcagcgttatatg
atggttgatgggcaaggtaactttggttctgttgatggagattctcctgcagcaatgcgt
tataccgaggtgagaatgcagaagatatcagaagatatgttagctgatattgaaaaagat
actgttgatcatcgtttaaattttgatgatactttacaagaaccaacagttttaccaaca
cgtattcctaacttattagtaaacggagcatctggtattgcagtaggtatggcaacaaat
atggcaccgcacaatttaacagaagttgtgaatggtacaattgcttatatcgaaaataga
gatattgagattgatgagttaatgcagcacattaaagcaccagattttcctacaggagga
accatttatggttacgaaggtgtaaaagatgcttttcatactgggcgtggacgtatagtg
atgcgtgccaaaactagttttgaggaggtaaaaggaagagagtgtattattgttactgaa
attccttatcaggtgaacaaagcagaaatgattaaaaaaactgctgagttagtaaatgat
aaaaagttagaaggaatagctaatatacgtgacgagtctgatagaaacggaatgcgtatt
gtttatattttaaagcgtgatgcaattcctaatattgtattaaataaattatttaagtac
acgcaattacaaacatcatttagtgtaaataatattgcgctagttaatggtcgtccagag
caattaaacttaaaacaattaattcattattttgttgagcatagacatgaagttgttgtt
cgtagaactgagtttgaattaaagaaagcagaagcaagagctcatattttagaaggatta
attattgcttctgataatattgatgaagtaattaagattattcgtgcatcaaaaaacggt
gatgaagctcgtgagaaattaatagagcgttttgaattgacagaaattcaggcgaaagca
attgtagaaatgcgtttgcgtcagttaacaggtttagaacaagacaaattacgtgctgag
ttcgacgagattatgttaacgattaccgacttaaaagatattttagcaaacgagccaaga
cgttatcaaataattacagatgagttgactcttgttcgtgataaatatggtgatgagcgt
cgttctgaaattcactatgctggtggagatatgcgtattgaagatatgataccaaactct
aaagttgtggtaactatttctcatgcaggttatgtaaaacgtaccaatctagacgaatat
aaagttcagaatagaggagggcgtggacaaaaaggagcaaccactagaaatgaagatttc
ttggaacatttatttgtaggtacaaaccatcaatatatgatgttcttcacgcaaaaagga
aaggtgttttggatgcgtgtttatgaaattccagaaggaggaaagaacaccaaaggtaga
gcaatgcaaaacttaatcaatatcgaatcggatgataaagtaaaagcatttttagttaca
caagatttaaaagatgaagagtacatcaaaaatcattatgtaattatggctactaaaaaa
ggacaagttaaaaaaacgcctttagagcaatattctcgtccaagaactaatggtataaat
gccattacaattaaagagggagatgagcttttagaagctaaattaaccactggtgatagc
caagtaatgttagccttaaaatctggtaaatctattcgttttgaagaagcaaaaacccgc
ccaatgggaagaactgcatcaggagttcgtggtattactttacagcacgataaggatgag
gttattggtatgattgcagtaaatgatatggatagtaatattttagtagtttctgaaaaa
ggatatggaaaacgatctaaattagaagattatcgtgttacaaaccgtggaggtaaagga
gtaaagacattaaatatatcagaaaaaacaggagaattagttgctattaaaaatgtagat
gattcaaatgatttaatgattattaataaatcaggacttacaatccgtatggctgtagaa
gatttacgtgttatgggacgtgcaacacaaggtgttcgtttaataaatattaaagattct
gacagtattgcagctgtagcaaaagtaatgcgtgaagaagacgaagaagaagatggcacg
gaaattgaaaatgaagatataacaaacgaagagcaagaataa
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