Tenacibaculum retecalamus: PG912_06480
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Entry
PG912_06480 CDS
T08858
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt00550
Peptidoglycan biosynthesis
trt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PG912_06480 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
trt01003
]
PG912_06480 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
trt01011
]
PG912_06480 (pbpC)
Enzymes [BR:
trt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PG912_06480 (pbpC)
Glycosyltransferases [BR:
trt01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PG912_06480 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
trt01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PG912_06480 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Sod_Fe_N
Motif
Other DBs
NCBI-ProteinID:
WBX72374
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All DBs
Position
1348448..1350796
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AA seq
782 aa
AA seq
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MKRVFNFLKKHNIKAIIIFFLMIAYYYCLPKKLFVTPTATVVTAKNNELLGAVIAKDGQW
RFPELDSVPIKFEQCILQFEDAHFYKHFGFNPISIGKAFVENIKAKKVIRGGSTLTQQVI
RLSRKNKGRSYQEKIIELILATRLEFRLSKKSILNLYASHAPFGGNVVGLEMASWRYFGL
QPHQLSWAETATLAVLPNAPSLIYPGKNQQKLKEKRNRLLKKLYKETIIDTVTYQLSLLE
ELPQKPYPLPTLATHFIQEVANKHPGKHLQSSIDIHLQTQVNNLVKQHYLRQKQNEVFNM
AVLVLDVKTRKVLSYVGNSPTDKAHQKDVNNVVSARSTGSTLKPFLYAQMLQSGAILPTQ
LVADVPTEIAGYTPKNFDLTFDGAVPANQALTRSLNIPAVRMLQSYGLEKFRADLKEYSI
RDINKSADYYGLSLILGGAEASLWDLCKTFANYAGVINHYEETKHNYYSNEFTEPSYIKS
DKISFGTVQENETHIDAGVAFTTLNTLTEVNRPFTDQAWKYFDSSQKIGWKTGTSFGNKD
AWAIGVTPKYIVGVWVGNSDGEGRPDLTGVGSAAPLLFNVFDVLPKSDWFLEPYEALVEE
SICEKSGYLALPICKSVKKRMPKNGVRAKPCPYHKQITVDASEKFQVNSNCESITNMKTK
TWFVLPPLMAHYYQQKNADYSVLPNYRNDCNKEQNNTMDFVFPTKYRSKISLTKGLNNKV
SPVILKVTHANTDALLYWYLNDVFIGKTSQYHEQAITPKIGNHKIIVIDNLGNVKTRFLE
IL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagtttttaacttcttaaaaaagcataatataaaagcaatcattatatttttt
ttaatgattgcatactattattgtttgcctaaaaaattgtttgtaacaccaacagctact
gtggttactgcaaaaaataatgaattgttaggtgctgtaattgctaaggatggtcaatgg
cgttttcctgaattagattccgttccaataaaattcgaacaatgtattttacagtttgag
gatgcacatttttataaacacttcggatttaatccaatatccataggaaaagcgtttgta
gaaaatataaaagctaaaaaggtgattcgtggcggaagtacacttacgcaacaagtaatt
cgattatcaagaaaaaataaaggacgctcttatcaagaaaaaataatagaattgattttg
gcaacgcgattagaatttcgattatcaaaaaaatcaattttaaacttatatgcttctcat
gctccttttggtggtaatgtagtagggttagaaatggcatcatggcggtatttcggtttg
caaccacaccaattatcatgggcagaaacagctactttagcagttttaccaaacgctccg
tcgttgatttatccgggcaaaaatcaacaaaaactgaaagaaaagcgaaaccgattactt
aaaaaattatataaagaaaccataattgatacagttacttatcaattatcactattagaa
gaactcccacaaaaaccgtatcctttaccaactttagcaacacattttatacaagaagta
gcaaataaacatccaggaaaacacctacaaagttctattgatattcatttacaaacacaa
gtaaacaatttagtgaaacagcattacctacgtcaaaaacaaaacgaagtttttaacatg
gcggttttagttttagatgttaaaacaagaaaggtactaagctatgtaggaaattcgcca
acagataaagcacatcaaaaagatgtaaataatgtggtatctgcaagaagtacaggaagt
actttaaaaccatttttatatgcacaaatgttacaatcgggtgcaattttaccaacgcaa
ttagtggcagatgtacctacagaaatagcgggatatacacctaaaaatttcgatttaact
tttgacggagctgtaccagctaaccaagctttaacacggtcgttaaatattcctgcggtt
cgaatgttacaatcatacggcttagagaaatttagggcagatttaaaagaatattcgatt
cgtgatattaataaatcggccgattattacggattgtcattaattttaggtggggcagaa
gctagcttgtgggatttatgtaaaacttttgcgaattatgccggagttataaatcattat
gaagaaacaaaacacaattactattcaaacgaattcacggaacctagttatataaaatct
gataaaatatcttttggtactgttcaggaaaatgaaactcatatagatgccggcgtagct
tttacaaccttaaatacgctaactgaagttaacaggccatttaccgatcaggcttggaaa
tattttgattcttcgcaaaaaataggctggaaaacaggcaccagttttggtaataaagat
gcttgggcaattggtgttactccgaaatacatagttggagtttgggttggtaattcagac
ggagaaggaagaccagatttaacaggtgttggtagtgctgctccgttgctatttaacgtg
tttgatgtgttaccaaaatcagattggtttttagagccttatgaggctttggtagaagaa
agtatttgtgaaaaaagtggctatttggcattgcctatttgtaaatcggttaaaaaaaga
atgcctaaaaacggagtgagagcaaagccatgcccgtatcacaaacaaattactgttgac
gcttcagaaaagtttcaggtgaactcaaattgtgagtcgattactaatatgaaaacgaaa
acatggtttgttttacctcctttaatggcacattattatcaacaaaaaaatgcagattat
agtgtgttgccaaactatcgaaatgattgtaataaggaacaaaataacaccatggatttt
gtgtttccaacaaaatatcgatctaaaatatcgttaacaaaagggcttaataacaaagtg
agtccggtaatcttaaaagttacacatgccaatacagatgctcttttgtattggtattta
aatgatgtttttataggtaaaacttctcaatatcatgaacaagcgataactccgaaaata
ggaaaccacaaaattatcgtgattgataatttaggaaacgtgaaaacccgatttttagaa
atattatag
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