Tenacibaculum retecalamus: PG912_07080
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Entry
PG912_07080 CDS
T08858
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt00020
Citrate cycle (TCA cycle)
trt00640
Propanoate metabolism
trt00660
C5-Branched dibasic acid metabolism
trt00720
Other carbon fixation pathways
trt01100
Metabolic pathways
trt01110
Biosynthesis of secondary metabolites
trt01120
Microbial metabolism in diverse environments
trt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PG912_07080 (sucD)
00640 Propanoate metabolism
PG912_07080 (sucD)
00660 C5-Branched dibasic acid metabolism
PG912_07080 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
PG912_07080 (sucD)
Enzymes [BR:
trt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PG912_07080 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
Motif
Other DBs
NCBI-ProteinID:
WBX70061
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All DBs
Position
complement(1489675..1490553)
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AA seq
292 aa
AA seq
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MSVLVNKDSKIIVQGFTGSEGTFHAGQMIDYGTNVVGGVTPGKGGQEHIGKPVFNTVDEA
VQKVGADTSIIFVPPAFAADAIMESAEAGIKVIICITEGIPTADMVKVKSYIDQLEGCTL
VDPNCPGVITPDEAKVGIMPGFIFKKGKVGIVSKSGTLTYEAADQVVKQGFGITTAIGIG
GDPIIGTTTKEAVELLMNDEETEAIVMIGEIGGNLEAEAARWIKADGNRKPVIGFIAGQT
APAGRTMGHAGAIVGGDDDTAQAKMKILAENGVHVVESPAKIGEMVAKVLSK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttttagtaaataaagattcaaaaattatagttcaaggatttacaggtagtgaa
ggtacttttcacgctggtcaaatgatcgattacggtacaaatgtcgtaggaggtgtaaca
ccaggtaaaggaggtcaagagcatatcggtaaaccagtttttaatacagttgatgaagct
gtgcaaaaagtaggagcagatacctctattatttttgtaccaccagcatttgctgctgat
gctattatggagtctgctgaagcaggaattaaagtaattatttgtattactgaaggaatt
cctactgctgatatggtaaaagttaaatcttatatcgatcaattagaaggttgtacttta
gttgatcctaactgtccaggagttattactccagatgaagctaaagttggtattatgcca
ggttttatcttcaaaaaaggtaaagtaggtattgtttctaaatcaggaacgttaacatat
gaagctgctgatcaggttgtaaaacaaggatttggtattactacagcaattggtattggt
ggagatccaattattggaactacaacaaaagaagctgttgagttattaatgaacgatgaa
gaaactgaagcaatcgttatgattggtgaaatcggtggaaacttagaagcagaagctgct
cgttggattaaagctgacggtaaccgtaagccagttattggttttatcgcaggacaaact
gcaccagctggtagaacaatggggcatgcaggtgcaattgtaggtggtgatgatgatact
gctcaagcaaaaatgaaaattttagctgaaaacggagttcacgttgttgaatctccagct
aagattggtgaaatggtagcaaaagtgttatctaaataa
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