KEGG   Tenacibaculum retecalamus: PG912_07220
Entry
PG912_07220       CDS       T08858                                 
Name
(GenBank) HD domain-containing protein
  KO
K00974  tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
Organism
trt  Tenacibaculum retecalamus
Pathway
trt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:trt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PG912_07220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:trt03016]
    PG912_07220
Enzymes [BR:trt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.72  CCA tRNA nucleotidyltransferase
     PG912_07220
Transfer RNA biogenesis [BR:trt03016]
 Eukaryotic type
  3'processing and CCA adding factors
   CCA adding factors
    PG912_07220
 Prokaryotic type
    PG912_07220
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 MIOX Ppx-GppA_III Cas3_HD
Other DBs
NCBI-ProteinID: WBX70087
LinkDB
Position
complement(1516514..1517935)
AA seq 473 aa
MQEQYFKEAISAEIFQYISKATEELQLKSYVIGGFVRDFILKRGVAKDIDVVAVGSGIEL
AEKVASLLPNKPKVQVFKTYGTAMLRYKDIEIEFVGARKESYTEDSRNPEVKPGSLQDDQ
NRRDFTINALALSLNKESFGLLLDPFDGISDLEAKIIKTPLDPDITYSDDPLRMMRAIRF
ASQLNFVIEAESLSAIAKNSKRINIITKERIIVELNKILESLKPSVGFLLLEQTELLERI
IPELTALKGVEEVEGQKHKDNFYHTLEVVDNISENTDDVWLRWAALLHDIGKAPTKRYHK
KQGWTFHAHEFVGSKMVFKLFKRLKLPLNNKMKFVQKMVMLSSRPIVLASDVTDSAVRRL
VFDAGEDVDSLMTLCEADITTKNPKKFNRYHKNFELVREKIKEVEERDKVRNFQPPITGE
EIMKEFNLTPCREIGQIKEAIKEAILEGEIPNEHEACYQYMIEKGKKLGLENN
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgcaagaacaatattttaaagaggcaatttctgccgaaatatttcaatacatatccaaa
gcaactgaagaattacaactaaaaagttatgtgattggtggctttgtacgtgattttatt
ttaaaaagaggtgtagcaaaggatattgatgttgttgctgttggaagtggaattgaatta
gctgaaaaagtagcttctttattgccaaacaaaccaaaagttcaggtttttaaaacatac
ggaacagcaatgttgcgttataaagatattgaaatagagtttgtaggcgctcgtaaagaa
tcgtatactgaagatagtagaaatccggaagtaaaacctggtagtttacaagatgatcag
aatagacgtgattttactattaacgctttggcattgagtttaaataaagaatcatttgga
cttttattagatccttttgatggaatctcagatttagaggctaaaattattaaaacacct
ctagatcctgatattacttattctgacgatccgttacgtatgatgcgtgccattcgcttt
gcttctcaattaaactttgtaattgaagcagagtctttaagcgctattgctaagaattcg
aaaagaataaatattattaccaaagaacgaataattgttgaattaaataagatattagaa
tcgcttaaaccatctgtaggatttttacttctagaacaaactgaacttttagagcgaatt
atacctgaattaacagcattaaaaggagtagaagaggtagaaggacagaagcataaagat
aatttttatcacactttagaagttgttgataatatatcagaaaacacagatgatgtttgg
ctacgttgggctgctttattgcacgatattggtaaagcaccaacaaaacgttatcataaa
aaacaaggttggacatttcatgcacatgaatttgtaggatctaaaatggtgtttaaacta
tttaagcgattaaaactaccattgaataataaaatgaagtttgttcagaaaatggttatg
ttaagttctcgaccaattgttttagcaagcgatgtaacagattcggcagtaagaagatta
gtttttgatgcaggtgaagatgtagatagtttaatgaccttatgtgaggcagatatcacc
actaaaaatcctaaaaaatttaaccgttatcataagaatttcgaacttgttcgtgaaaaa
attaaagaagtagaagagcgtgataaagtgcgtaattttcaaccaccaattactggagaa
gaaattatgaaggagtttaatttaactccatgtcgagaaatcggtcaaataaaagaagct
ataaaagaagctattttagaaggtgaaattccaaatgaacacgaagcttgttatcaatat
atgatagaaaaaggtaagaagctaggtttagaaaataattaa

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