Tenacibaculum retecalamus: PG912_08105
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Entry
PG912_08105 CDS
T08858
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
trt
Tenacibaculum retecalamus
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trt03400
]
PG912_08105
DNA repair and recombination proteins [BR:
trt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PG912_08105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
AAA
AAA_16
TrwB_AAD_bind
ResIII
FtsK_SpoIIIE
AAA_30
Zot
AAA_19
CbiA
P-loop_TraG
AAA_7
nSTAND3
TraG-D_C
Zeta_toxin
Hydrolase
AAA_6
SRP54
Motif
Other DBs
NCBI-ProteinID:
WBX70249
LinkDB
All DBs
Position
complement(1702408..1703931)
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AA seq
507 aa
AA seq
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MSKTEAFFKYITEGYKSKGDFITLGAGMLGEETVTNALVNIPLKTLNRHGLIAGATGTGK
TKTLQVLAENMSDKGIPVLLMDVKGDLSGLAQPSPGHAKIDERHEKIGIPFNATKYPIEI
LSISEQEGIRLRATVSEFESVLLARILDLTETQSGIVAIIFKYCDDNKLPLLDLKDFKKI
LQFVTNEGKEEIQEEYGRISTASTGAILRKIVEIDQQGGDLFFGEKSFEVDDLTRVDENG
RGLISVLRLTDIQDKPKLFSTFMMQLLAEVYETFPEQGDSDQPELVIFIDEAHLVFEEAS
KALLNQIESIVKLIRSKGIGLYFVTQNPKDVPEDVLAQLGMKIQHALRAFTAKDRKAIKL
AAENYPDSEYYDTKEVLTQLGIGEALVSVLNEKGIPTPLARTMLRAPMSRMDVLTAKEIK
QVLDNSRLIPKYNDIVDRESAYELLNDKIEQINKEKTAAARKEEAAKTSRRSSSTRSRST
RQNPIIKVLTSATFIRSVFGILKKVLK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaccgaagcgtttttcaaatacattactgaaggctataaaagtaaaggagat
tttatcacattaggtgctggtatgttgggggaagaaacagtaacaaatgcgctggtaaat
attccattaaaaaccttaaaccgccacggattaattgccggagcaacaggtacaggtaaa
actaaaactttgcaagtattggcagaaaacatgtctgataaaggaattccggtgttgtta
atggatgtaaagggtgatttaagcggattagcacaaccaagcccaggacatgctaaaata
gatgagcgtcacgaaaaaataggtatcccttttaatgctactaaatatccgatagaaatt
ttatcaatatcagagcaagaaggtatacgtttacgtgcaacagtatctgaatttgaatct
gttttattagcgcgtattttagatttaacagaaacccaatcgggaattgtagcaattatt
tttaaatattgtgatgataataaattacctttattagatttaaaagattttaagaaaatc
cttcaatttgtaaccaatgaaggaaaagaagaaattcaagaagaatacggaagaatttct
acagcaagtacaggagcaattcttagaaaaattgtagaaattgatcaacaaggcggtgat
ttattttttggcgaaaaatcatttgaagtagatgatttaacgcgtgttgatgaaaacgga
cgtggtttaatatctgttttaagattaacagatattcaagataaaccaaagttgttttca
acttttatgatgcaattattagcagaagtgtatgaaacatttccagagcaaggagatagc
gatcaacctgagttagttatttttattgatgaagcacatttagtttttgaagaagcatcg
aaagcattgttaaatcaaattgaaagtattgtaaaattaattcgttcgaaaggaataggg
ttgtattttgtaacgcaaaatccgaaggatgtgccagaagatgttttagcacaattagga
atgaaaattcagcatgccttacgagcatttacggcaaaagacagaaaagcaattaaatta
gctgccgaaaattatccagattctgagtattacgatactaaagaagtattaacgcagtta
ggaataggagaagccttggtatcggttttaaatgaaaaaggaattccaactccgttagca
agaacgatgttacgtgcacctatgagtagaatggatgtgcttacagcgaaagaaattaaa
caggtattagacaattcgagattgatacctaaatataacgatattgttgatagagaaagc
gcatacgagcttttaaatgataaaattgaacaaatcaataaagaaaaaacggcagcagct
cgcaaagaagaagcagcgaaaacaagcagaaggtcttcgtcaacacgaagtagaagtaca
cgacaaaatccgattataaaagtattaaccagtgcaacttttattcgtagtgttttcgga
atattaaaaaaagtattaaaataa
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