Tenacibaculum retecalamus: PG912_08275
Help
Entry
PG912_08275 CDS
T08858
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt00220
Arginine biosynthesis
trt00240
Pyrimidine metabolism
trt00250
Alanine, aspartate and glutamate metabolism
trt01100
Metabolic pathways
trt01110
Biosynthesis of secondary metabolites
trt01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PG912_08275 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PG912_08275 (carB)
00220 Arginine biosynthesis
PG912_08275 (carB)
Enzymes [BR:
trt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PG912_08275 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
ATP-grasp
GARS_A
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_5
RimK
Motif
Other DBs
NCBI-ProteinID:
WBX70279
LinkDB
All DBs
Position
complement(1756883..1759735)
Genome browser
AA seq
950 aa
AA seq
DB search
MPKNQNLKSILIIGSGPIVIGQACEFDYSGTQALRSLREDGIETVLINSNPATIMTDPTM
ADHVYLLPLNTKSLIQILKEHPEIDAVLPTMGGQTALNLCIEADEKGIWKDFGVEIIGVN
IDAINITEDREKFRNLMIDIGIPMAPQATATSFLKGKEIAQEFGFPLIIRASFTLGGEGA
SFVYKEEDFDALLTRGLEVSPIHEVMIDKALIGWKEYELELLRDANDNVVIICSIENMDP
IGIHTGDSITVAPAMTLSDKTFQKMRDMAIHMMRNIGDFAGGCNVQFAISPDEKEDIIAI
EINPRVSRSSALASKATGYPIAKIAAKLALGYHLDELDNQITKSTSALFEPTLDYVIVKI
PRWNFDKFEGSDRTLGLQMKSVGEVMGIGRSFQEALHKATQSLEIKRNGLGADGKENKNY
EEIIEKLTYASWDRVFIIYDAIKMGIPLSKIHEITQIDMWFLKQYEELHEIEKEISKFSV
DTLDRDLLLEAKQKGYGDRQIAHMLQCLESEVYKKREELNINRVYKLVDTCAAEFKAKTP
YYYSTFESDIVTKEGETVIANESEVTPKKKIIVLGSGPNRIGQGIEFDYCCVHGILAAAE
CGYETIMINCNPETVSTDFDTADKLYFEPVFWEHIYDIIKHEKPEGVIVQLGGQTALKLA
EKLTKYGIKILGTSFEALDLAEDRGSFSDLLKNNNIPYPEFGIAETADEALALADELDFP
ILVRPSYVLGGQGMKIVINKEELIEHVVDLLRRMPGNKLLLDHYLDGAIEAEADAICDGE
NVQIIGIMEHIEPCGVHSGDSNATLPAFNLGDLVLQQIKDHTKTIALELKTVGLINVQFA
IKNDIVYIIEANPRASRTVPFIAKAYKQPYVNYATKVMLGEKKVTDFDFNPQLDGYAIKQ
PVFSFNKFPNVNKQLGPEMKSTGESILFIDDLKDDQFYDLYSRRKMYLTK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaatcaaaaccttaaatctattttaataatcggatcaggaccaattgttatt
ggacaagcctgtgagtttgattattctggaacgcaagctttgcgttctttacgcgaagac
ggaattgaaactgttttaatcaattcgaacccagcaacaatcatgaccgaccctacaatg
gccgatcatgtttatcttttgcctttaaatacaaaatcgttaattcaaattttaaaagag
catccagaaattgatgccgttttaccaacaatgggtggtcaaacagcattaaatttatgt
attgaagctgacgaaaaaggaatttggaaagattttggagtagaaattattggtgttaat
attgatgctattaatattacagaagatcgtgagaagtttagaaacttgatgatagatatt
ggtattccaatggcacctcaagcgacagctacttctttcttaaaaggaaaagaaattgca
caagaatttggatttcctttaattattagagcatcctttactttaggtggtgaaggagct
tcttttgtttataaagaagaagactttgatgctttgttaactcgcggattagaagtttct
cctattcatgaggtaatgattgataaagcacttatcggttggaaagaatacgagttagaa
ttattaagagacgcgaatgataatgtagttattatttgttctattgaaaatatggatccg
atcggaattcacacaggagattctattacggtagctccagcaatgacactttctgataaa
acattccaaaaaatgcgtgatatggcaattcatatgatgcgtaatattggtgattttgct
ggtggatgtaacgttcaatttgcgatttctcctgatgaaaaagaagacataatagcaatt
gaaattaatccacgtgtatcgcgttcttctgctttagcaagtaaagcaactggatatccg
attgcgaaaattgccgctaaattagctttgggttatcatttagatgaattagataatcaa
attacaaaatctacatcagcattatttgagccaacgttagattacgttattgtaaagatt
ccacgttggaacttcgataaattcgaaggttcagacagaactttaggtttacaaatgaaa
tctgttggtgaagtaatgggaattggacgttcgtttcaagaagcattacataaagcaaca
caatctcttgaaattaaacgtaatggtttaggtgctgatggaaaagaaaataagaattac
gaagaaattatagagaaattaacttacgcatcttgggatcgtgtttttattatttatgat
gctattaaaatgggaattccgttgagtaaaatccacgaaattacgcagattgatatgtgg
ttcttaaaacaatatgaagaattacacgaaatagaaaaagaaatatctaaattcagtgtt
gatacacttgatagagatttgttattagaagcaaaacagaaaggatatggagatcgtcag
attgcacatatgttacaatgtttagaaagtgaagtatataagaaaagagaagagttaaat
attaatagagtttataagttagtagatacttgtgcggcagaatttaaagcaaaaactccg
tattattattcaactttcgaaagtgatattgtaactaaagaaggtgaaacagttatagct
aacgaaagtgaagttacaccaaaaaagaaaattatagttttaggttcaggaccaaaccga
atcggacaaggaattgaatttgattattgttgtgttcatggtattttagcagctgcagaa
tgtggttacgaaacgattatgattaactgtaatccagaaacggtctctaccgattttgat
accgcagataaattatacttcgaacctgttttttgggagcatatttatgatatcatcaaa
catgaaaaaccagaaggagttattgttcaattaggagggcaaactgctttaaagttagca
gaaaagttaacgaaatacggaattaaaattttaggaacctcttttgaagccttagattta
gcagaagatagaggaagtttttcagacttgttaaaaaacaataatattccgtatccagaa
ttcggaattgcagaaactgcggatgaagctttggctttggcagatgaattagattttccg
attttagtaagaccttcttatgttttaggaggacaaggaatgaaaattgttatcaacaaa
gaagaattaatagagcatgttgttgatttattaagaagaatgcctggtaataaattatta
ttagaccattatttagatggagccattgaggcagaagcagatgcaatttgtgatggtgaa
aacgtgcaaattatcgggattatggagcatattgagccttgtggagtgcactctggagat
tcaaatgcaacattaccagcctttaatttaggtgatttagtattgcagcaaataaaagat
catacaaaaacaatcgctttagaattgaaaacagttggtttgattaacgttcagtttgca
attaaaaacgatattgtttatattattgaagcaaatccaagagcatcacgtacagttcct
tttatagcaaaagcttataaacagccttatgtaaattatgcgactaaggtaatgttagga
gaaaagaaagtaacagattttgattttaatcctcagttagatggttatgcaataaaacaa
cctgtattttcattcaataaatttccgaatgtaaacaaacaattaggacctgaaatgaaa
tcgacaggagaaagtattctgtttattgatgatttaaaagatgatcagttttacgatttg
tattcaagacgtaaaatgtatttaacaaagtaa
DBGET
integrated database retrieval system
