KEGG   Tenacibaculum retecalamus: PG912_09140
Entry
PG912_09140       CDS       T08858                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
trt  Tenacibaculum retecalamus
Pathway
trt00300  Lysine biosynthesis
trt00470  D-Amino acid metabolism
trt01100  Metabolic pathways
trt01110  Biosynthesis of secondary metabolites
trt01120  Microbial metabolism in diverse environments
trt01230  Biosynthesis of amino acids
Module
trt_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:trt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PG912_09140 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PG912_09140 (dapF)
Enzymes [BR:trt01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PG912_09140 (dapF)
SSDB
Motif
Pfam: DAP_epimerase CntK_N Pro_racemase DUF6492
Other DBs
NCBI-ProteinID: WBX70437
LinkDB
Position
1930920..1931690
AA seq 256 aa
MILNFYKYQGTGNDFIIIDNRTITFPKNDIELITKLCDRHFGIGADGLILLENDAKTDFK
MIYFNADGTETMCGNGGRCAVAFAKKLNLIDCKTTFTAFDGTHYAEIDNDIISLHMVDVN
EININKDAVYAFTGTQHHVELVESLDNYPVFENGKKIRYSYDSPGANVNFTQQINTNTFR
VRTYEKGVENETLACGTGVTAVAIAMYATKKTTEQLIKLPVEGGLLEVSFDEKNGKFSNI
FLKGSAVCVFKGEIEL
NT seq 771 nt   +upstreamnt  +downstreamnt
atgattttgaatttttataaataccaaggaacaggaaacgactttattattatagataat
cgtacaataacattccctaaaaatgatattgaattaatcactaaactatgtgacaggcat
tttggtattggtgctgatggattaattcttttagaaaatgatgccaaaaccgactttaaa
atgatttattttaatgcagatggaaccgaaactatgtgtggaaatggaggaagatgtgct
gttgcctttgctaaaaaattaaaccttattgattgtaaaacaacttttactgcttttgat
ggtacacattatgccgaaattgacaacgacattatttctttacatatggtagacgtaaac
gaaatcaacataaacaaagatgctgtttatgcttttactggcacacaacatcatgtagaa
ttggttgaatccttagataattaccctgtttttgaaaacggaaaaaaaataagatatagt
tacgattctcctggggctaacgttaattttacgcaacaaataaacaccaatacttttagg
gtaagaacctatgaaaaaggtgttgaaaatgaaaccttagcatgcggtaccggagtaact
gcggttgcaattgcaatgtatgctacaaaaaaaactaccgaacaactaattaaattacct
gttgaaggtggtttacttgaagttagttttgatgaaaaaaacggaaaattcagcaatatc
tttttaaaaggatcagccgtttgtgtgtttaaaggcgaaattgaattgtaa

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