Tenacibaculum retecalamus: PG912_09140
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Entry
PG912_09140 CDS
T08858
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt00300
Lysine biosynthesis
trt00470
D-Amino acid metabolism
trt01100
Metabolic pathways
trt01110
Biosynthesis of secondary metabolites
trt01120
Microbial metabolism in diverse environments
trt01230
Biosynthesis of amino acids
Module
trt_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PG912_09140 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PG912_09140 (dapF)
Enzymes [BR:
trt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PG912_09140 (dapF)
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Motif
Pfam:
DAP_epimerase
CntK_N
Pro_racemase
DUF6492
Motif
Other DBs
NCBI-ProteinID:
WBX70437
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Position
1930920..1931690
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AA seq
256 aa
AA seq
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MILNFYKYQGTGNDFIIIDNRTITFPKNDIELITKLCDRHFGIGADGLILLENDAKTDFK
MIYFNADGTETMCGNGGRCAVAFAKKLNLIDCKTTFTAFDGTHYAEIDNDIISLHMVDVN
EININKDAVYAFTGTQHHVELVESLDNYPVFENGKKIRYSYDSPGANVNFTQQINTNTFR
VRTYEKGVENETLACGTGVTAVAIAMYATKKTTEQLIKLPVEGGLLEVSFDEKNGKFSNI
FLKGSAVCVFKGEIEL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgattttgaatttttataaataccaaggaacaggaaacgactttattattatagataat
cgtacaataacattccctaaaaatgatattgaattaatcactaaactatgtgacaggcat
tttggtattggtgctgatggattaattcttttagaaaatgatgccaaaaccgactttaaa
atgatttattttaatgcagatggaaccgaaactatgtgtggaaatggaggaagatgtgct
gttgcctttgctaaaaaattaaaccttattgattgtaaaacaacttttactgcttttgat
ggtacacattatgccgaaattgacaacgacattatttctttacatatggtagacgtaaac
gaaatcaacataaacaaagatgctgtttatgcttttactggcacacaacatcatgtagaa
ttggttgaatccttagataattaccctgtttttgaaaacggaaaaaaaataagatatagt
tacgattctcctggggctaacgttaattttacgcaacaaataaacaccaatacttttagg
gtaagaacctatgaaaaaggtgttgaaaatgaaaccttagcatgcggtaccggagtaact
gcggttgcaattgcaatgtatgctacaaaaaaaactaccgaacaactaattaaattacct
gttgaaggtggtttacttgaagttagttttgatgaaaaaaacggaaaattcagcaatatc
tttttaaaaggatcagccgtttgtgtgtttaaaggcgaaattgaattgtaa
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