Tenacibaculum retecalamus: PG912_09745
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Entry
PG912_09745 CDS
T08858
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt03030
DNA replication
trt03430
Mismatch repair
trt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG912_09745 (holA)
03430 Mismatch repair
PG912_09745 (holA)
03440 Homologous recombination
PG912_09745 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trt03032
]
PG912_09745 (holA)
03400 DNA repair and recombination proteins [BR:
trt03400
]
PG912_09745 (holA)
Enzymes [BR:
trt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG912_09745 (holA)
DNA replication proteins [BR:
trt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG912_09745 (holA)
DNA repair and recombination proteins [BR:
trt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG912_09745 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
LAMB4
Motif
Other DBs
NCBI-ProteinID:
WBX70542
LinkDB
All DBs
Position
complement(2062479..2063480)
Genome browser
AA seq
333 aa
AA seq
DB search
MNEIKNIIADIKGGNIKPVYFLMGEEPYYIDKISDYIEKNVLDESEKGFNQVVMYGRDVS
IDEIISSAKRYPMMADRQVIIVKEAQDLSRTIDKIEAYATNPQPTTVLVFNYKYKKLDKR
KKAYKTIAKNGLIYESKKLYENQVSDWIRRVLGGKKYNIEPKASQMLVEFLGVDLSKIAN
ELDKLTSVLPKDSIITDKHIEENIGISKDFNNFELRKSIGQRDVVKANRIINYFAQNPKS
NPLVMTISLLNSFFTQLLMYHGLKDKSKGSVAKNLGVNPFFVDDYSSAAKNYPMRKVSQV
IALLREADVKSKGVGANQSHRDILKELLFKIMH
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaattaaaaatattatagctgatataaaaggaggaaacataaagcctgtttat
ttcttaatgggtgaggagccttattatatcgataaaatttctgattatatagaaaaaaat
gtacttgatgagtctgagaaaggatttaatcaagtagtaatgtatggtcgagatgtttcg
attgatgaaattatttcgtcagcaaaacgatacccgatgatggcagatcgccaggtgatt
attgtaaaagaagcacaagatttaagtcgtacgattgataagattgaggcttatgctaca
aatccgcaaccaactacggttttggtttttaattataaatacaaaaagttagataaacgt
aaaaaagcctataaaacaattgctaaaaatggattgatttacgagagtaagaaattatat
gaaaatcaagtttctgattggattcgtagagttttaggcggcaaaaagtacaatatagaa
cctaaagcatctcagatgttagtagagtttttgggagttgatttaagtaaaatagcaaac
gagttagataaattaacatctgttttaccaaaagatagcattataaccgataagcatatt
gaagaaaatatcggtatttctaaagattttaataatttcgagttgcgtaaatcaataggg
caaagagatgtggttaaggcaaatagaataatcaattattttgcgcaaaacccgaaaagt
aacccgttagtaatgactatttcattgttaaatagtttttttacacaactattaatgtat
catggattaaaagataaatcgaaaggttcggtagctaaaaatttaggtgtgaatccgttt
tttgtagacgattatagctcggctgcaaaaaattatccaatgcgaaaagtatcacaagta
atcgctttattacgtgaagcagatgtaaaaagtaaaggggtaggagctaatcaatctcat
agagatattttaaaggaattactatttaaaataatgcattaa
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