Tenacibaculum retecalamus: PG912_09945
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Entry
PG912_09945 CDS
T08858
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
trt
Tenacibaculum retecalamus
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trt03009
]
PG912_09945 (rimO)
Enzymes [BR:
trt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PG912_09945 (rimO)
Ribosome biogenesis [BR:
trt03009
]
Prokaryotic type
ribosomal protein modification factors
PG912_09945 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WBX70580
LinkDB
All DBs
Position
complement(2103121..2104473)
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AA seq
450 aa
AA seq
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MRTKSPKQNKINVVTLGCSKNIYDSEVLMGQLKANGKDVVHEDPEDDGNIVVINTCGFIG
KAKEESIDTILHYAQRKEAGEIDKVFVSGCLSERYKPDLEAEIKNVDQYFGTHELPELLK
VLEADYKHELIGERLTTTPKHYAYLKIAEGCDRPCSFCAIPLMRGKHKSTPIEEIVIEAT
KLAEKGIKELMLIAQDLTYYGLDIYKKRALADLLKELVKVDGIEWIRLHYAFPTGFPMDV
LDVMKNEPKVCNYLDIPLQHINTEILKSMKRGTTHEKTTSLIHKFREAVPNMAIRTTLIV
GYPGETEEQFQELKDWVEEMRFERMGAFEYSHEENTGAFVLEDDVPADVKFRRVNEIMEV
QSQISWELNQQKIGKTFRCLFDRKDGEYFYGRTEFDSPDVDNDVIVDATKHYIKLGEFID
IKIDEAGDFDLYGTPLVKQEKPTSLNQKRK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaaaatcaccaaagcaaaacaaaatcaacgtagttactttaggatgttctaaa
aacatttacgatagtgaagtgttaatggggcaattaaaagccaatggtaaagacgtggtt
catgaagatcctgaagatgatggtaatattgttgtaattaatacttgtggttttataggt
aaggccaaagaagaaagcattgatactattttgcattatgcgcagcgtaaagaagcagga
gagatagacaaagtatttgtttctggttgtttaagtgagcgttataagcccgatttagaa
gctgaaattaaaaatgtagatcagtattttggtacgcacgaattaccagaattattaaaa
gtattagaagcagattataaacacgaattaattggtgaacgtttaacaacaacaccaaaa
cattacgcgtatttaaaaattgctgaaggttgcgatcgtccttgttctttttgtgcaatt
cctttaatgagagggaaacataaatctacaccaattgaagaaattgttatagaagctaca
aaattagccgagaaaggaattaaagaattgatgttaattgcacaagatttaacctattac
ggattagatatttataaaaaacgtgctttagctgatttattaaaagaattggtaaaggta
gacggaatagaatggattcgtttgcattatgcatttcctacaggttttccgatggatgta
ttagacgtaatgaaaaacgaaccaaaggtttgtaattatttagatattccgttacagcat
ataaataccgagattttaaaatcgatgaagcgtggtacaacccacgaaaaaacaacttca
ctaattcataagtttagagaagctgtgccaaatatggcaatccgtactactttaattgtt
gggtatccgggagaaacggaagaacaatttcaggaattaaaagattgggttgaagaaatg
cgttttgagagaatgggtgcttttgaatattctcatgaagaaaatacgggcgcttttgtt
ttagaagatgatgttcctgcggatgtaaagttccgtcgtgtaaacgaaattatggaagtg
caatctcaaatttcttgggaattaaatcagcaaaaaataggaaaaacgttccgttgttta
tttgatagaaaagacggagaatatttttacggtcgtacagaatttgattcaccagacgtt
gataatgatgtaattgtagatgctacgaaacattatataaaattaggtgagtttatagat
attaaaatagatgaagctggtgattttgacttatacggaactccgttggttaaacaagaa
aaaccaacaagcttaaatcaaaaaagaaaataa
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