Tenacibaculum retecalamus: PG912_10810
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Entry
PG912_10810 CDS
T08858
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt00521
Streptomycin biosynthesis
trt00523
Polyketide sugar unit biosynthesis
trt00541
Biosynthesis of various nucleotide sugars
trt01100
Metabolic pathways
trt01110
Biosynthesis of secondary metabolites
trt01250
Biosynthesis of nucleotide sugars
Module
trt_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PG912_10810 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PG912_10810 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PG912_10810 (rfbC)
Enzymes [BR:
trt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PG912_10810 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
WBX70722
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Position
complement(2287716..2288270)
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AA seq
184 aa
AA seq
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MIFTKTEIQDIVTIEPRVFKDERGYFLESFNQQQFNENIKITTFVQDNESMSTRGVLRGL
HFQKPPFAQAKLVRCIKGRIMDVAVDIRIGSPNYGKHVAIELSEENKKQLFIPRGFAHGF
VVLSATAIFAYKVDNKYAPEHDCGIKWDDQELNIDWKIESAEIHLSDKDTKLEYLKDFKS
PFKY
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgatttttaccaaaactgaaattcaagacattgtaactattgagcctcgagtttttaaa
gatgaaagaggttattttctagaatcattcaatcagcaacaatttaatgagaatattaaa
atcaccacttttgtacaagacaatgaatccatgtctacaagaggtgttttaagaggcctg
cattttcaaaaaccaccatttgctcaggcaaaattagtgcgttgtattaagggtaggatt
atggatgttgctgttgatataagaattggctcaccgaattatggaaagcacgtagctatt
gagttatcagaagaaaataagaaacagttatttatacctagaggttttgcgcacggtttc
gtagtgttgtcagcaactgcaatttttgcttataaagtagataataagtatgctccagaa
catgattgtggaataaaatgggacgatcaagaattaaatattgattggaaaattgaatca
gcagaaatacatttatcagataaagataccaagttggagtatttaaaagattttaaaagt
ccatttaaatattaa
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