Tenacibaculum retecalamus: PG912_11210
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Entry
PG912_11210 CDS
T08858
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PG912_11210 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
trt01007
]
PG912_11210 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trt03016
]
PG912_11210 (lysS)
Enzymes [BR:
trt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PG912_11210 (lysS)
Amino acid related enzymes [BR:
trt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PG912_11210 (lysS)
Transfer RNA biogenesis [BR:
trt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PG912_11210 (lysS)
Prokaryotic type
Other AARSs
PG912_11210 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AlkZ-rel
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
WBX70783
LinkDB
All DBs
Position
2373889..2375586
Genome browser
AA seq
565 aa
AA seq
DB search
MQLSEQEVVRREKLGKLRELGINPYPADLFPLDSNSKVIKQEFEEGKKVVIAGRLMSRRI
QGKASFAELQDSEGRIQVYFNRDEICAGEDKTLYNEVYKKLLDIGDFIGIEGELFTTQVG
EKTVMVKGFKLLSKSLKPLPLPKVDAEGNTFDGFTDPEMRYRQRYADLVVNPHVKEVFVK
RTKLFTAMRNFFNDAGYFEVETPILQPIAGGASARPFVSHHNALDIPLYMRIANELYLKR
LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTEKLLEHCAIAVN
GTTETTFGEHKVDFKAPYARVTMADSIKHFTGFDIIGKSESELFEAAKGMGIEVDATMGK
GKLIDEMFGEKCEGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYS
ELNDPIDQRERFEAQLKLAERGDDEASEFIDHDFLRALEYGMPPTSGLGIGMDRLIMYLT
NNASIQEVLFFPQMRPEKKAPAVELNDDEKAVLALIEKAEKIALNDLKTQSGLSNKKWDK
TIKGLTKNKLAKVEKNDEGLFVEIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatcagaacaagaagttgtacgtagagaaaagttaggaaaactacgtgaatta
ggtattaatccgtaccctgctgatttatttccactagattcaaattcgaaagttattaaa
caggaatttgaagaagggaaaaaggtggtaattgctggtagattaatgagtcgtcgtatt
caaggaaaagcatcgtttgctgaattacaagatagcgaaggtcgtattcaggtttacttt
aatcgagacgaaatttgtgctggagaagacaaaactttatacaacgaagtatataaaaaa
ttattagatattggtgatttcattggtattgagggtgaattatttacaactcaagttggt
gaaaaaacagtaatggtaaaagggtttaaattattaagtaaatctttaaaaccattgcct
ttaccaaaggttgatgccgaaggaaatacgtttgacgggtttacagatcctgagatgcgt
taccgtcagcgttatgccgatttagtggtaaacccacacgtaaaagaagttttcgtaaag
cgtaccaagttatttactgcgatgcgtaacttttttaacgatgctggttattttgaagtt
gaaactccaattttacaaccaattgctggtggtgcttctgcaagaccatttgtttcgcat
cacaacgcattagacattccgttatatatgcgaattgctaacgaattatatcttaaaagg
ttaattgttggtggttttgatggtgtgtatgagttttctaaaaactttagaaatgaagga
atggacagaactcataatcctgaatttacagcaatggaaatttatgtagcctacaaagac
tacaactggatgatggattttactgaaaaattattagaacattgtgctattgccgttaac
ggaacaactgaaacaacttttggtgaacataaagttgattttaaagcaccgtatgctaga
gttacgatggcagattctataaaacattttactggttttgatattatcggaaagtctgaa
agcgagctttttgaagctgctaaaggaatgggaattgaggtggatgcaaccatgggtaaa
ggaaaattaattgatgaaatgtttggtgaaaaatgtgaaggaaattacattcagcctact
tttattactgattacccgaaggaaatgtctcctttatgtaaagaacatagagacaaccct
gaattaacagaacgttttgagttaatggtttgtggtaaagaaattgccaatgcatattct
gaattaaacgacccaattgatcagcgagagcgttttgaagcgcaacttaaattagctgaa
cgtggtgatgatgaagcgagtgagtttattgatcatgattttttacgtgctttagaatac
ggaatgcctccaacgtctggtttaggaattggtatggaccgtttaattatgtatttaacc
aacaatgcatcgatacaagaagtgttatttttccctcaaatgagacctgagaaaaaagca
cctgctgttgaattaaacgacgatgaaaaagcagttttagctttgattgaaaaagctgaa
aagattgctttaaatgatttaaaaacacaatcgggtttatctaataaaaaatgggacaaa
acgattaaaggtttaaccaaaaataaattagctaaagttgaaaaaaatgacgaaggttta
tttgttgaaatagcataa
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