Tenacibaculum retecalamus: PG912_11400
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Entry
PG912_11400 CDS
T08858
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
trt
Tenacibaculum retecalamus
Pathway
trt00550
Peptidoglycan biosynthesis
trt01100
Metabolic pathways
trt01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PG912_11400 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PG912_11400 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
trt01011
]
PG912_11400 (mrdA)
Enzymes [BR:
trt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PG912_11400 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
trt01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PG912_11400 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
WBX70820
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All DBs
Position
2410160..2412043
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AA seq
627 aa
AA seq
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MKRSFLLIFLITLVGLIYIVRLFQLQIVRGGNLNPIQSSAIKIEYDYPERGYVYDRNGKL
LVANQLSYDVMVVPKDVMPLDTTEFCSLLKITKEDFKKRFKKAEKFARWLPSKFLKQLAK
EDFAYLQEKLPKYKGFYIQKRIIRDYPIKTGANILGFIAEVNERKARTNNYYEQGELIGK
LGVEKQYETILRGVKGKKRFKRNNLNKITGSYKEGKYDTLAVTGKDLTLTIDSELQQYGE
LLMKGKRGGIVAIEPKTGEILALITAPSYDPNLLVGRKRSPNSRKLFNDTINMPTFDRGL
QAMYPPGSPFKILNGLIGLQEEVIDKNFGVYCHHGYRYGKRKNEFMKCHCRITGRRIRLK
TAIAKSCNSYFATTYKKIIDKTGNPKEGMDNWNKHIESFGLGNYLGYDLPAGRKGKIPDA
EFYNKWYKNRWHSTYTISNSIGQGEILTTPMQLANMTAAIANRGYFYTPHIVKKIDNKTV
IDSVYLTRRNTTIDPKHFPIAIDAMHEVFTYGTAKWYQIKGIDICGKTGTAENKIKIIDG
KKVQAQDHSILIAFAPKENPQIAMAVYIENGGYGSTIAAPITSLMIEKYIKGSVTKKYLE
ERMINMSLQKEYDKLIKKKDTLAPGTK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaagtttcttacttatatttttaattacacttgttggattaatttacattgtt
agattatttcagctacaaattgttcgcggaggaaacctaaatccgatacaaagttctgct
attaaaattgaatatgattatcctgaacgtgggtatgtatacgatagaaacggaaagtta
ctagtagcaaatcaattatcatacgacgtaatggtagttcctaaagacgtaatgcctttg
gatactacagagttttgctcacttttaaaaataactaaagaagattttaaaaaacgtttt
aaaaaagctgaaaaatttgcacgttggcttccttcaaaattccttaagcaattagcaaaa
gaagactttgcgtatttgcaagaaaagttaccaaaatacaaggggttttatattcagaaa
cgtattattagagattacccaattaaaactggtgctaatattttaggttttattgctgaa
gtaaatgaacgaaaagcaagaacaaataattactacgaacaaggagaattaattggaaaa
cttggcgtagaaaaacaatatgaaacaattcttagaggcgttaaaggtaaaaaacgtttt
aaaagaaataatttaaataaaattaccggctcttacaaagaaggaaaatacgatacactt
gcggtaacaggtaaagatttaacactaactattgatagtgaattacaacaatatggagaa
ttattaatgaaaggaaaaagaggtggtattgtcgcaatcgaacccaaaaccggtgaaatt
cttgcacttattaccgcgccctcttatgaccctaacttattagtgggacgaaaaagatca
cccaattcaagaaaactttttaatgacaccattaacatgccaacttttgatcgtggctta
caagcaatgtaccctcctggctctccttttaaaatcctcaatggtttaattggtttacag
gaagaagttattgataaaaattttggagtgtattgtcatcatggatatcgttacggaaaa
cgtaaaaatgaattcatgaaatgtcattgtagaattacaggaaggcgaatccgtttaaaa
acagcaattgccaaatcgtgtaatagttattttgctaccacttataaaaaaattatagat
aaaacaggtaatccaaaagaaggcatggataactggaacaagcacatcgaaagctttggt
ttaggtaattatttaggctatgatttacctgcaggaagaaaaggaaaaattcctgatgcc
gaattttacaacaaatggtataaaaacagatggcattctacctataccatttcaaactca
ataggacaaggtgaaatattaaccaccccaatgcaattagcaaatatgacagctgcaatt
gcaaacagaggttatttttacacaccacatattgtaaagaaaattgataataaaacagtt
atagattcagtttatttaacccgtagaaatacaactatcgatccgaagcattttcctatt
gcaattgatgcaatgcacgaggtttttacatacggaactgcaaaatggtatcaaataaaa
ggaattgacatctgtggaaaaacaggaactgccgaaaataaaattaaaattattgatggt
aaaaaagtacaagcacaagatcactccatcttaatcgcttttgcaccaaaagaaaaccca
caaatagccatggctgtttatattgaaaacggtggttatggctcaacaatagctgctccg
ataacaagcctaatgatagaaaaatatattaaaggttcagttactaaaaaatatcttgaa
gaacgcatgattaatatgagtcttcagaaagagtatgacaaattaattaaaaagaaagat
acccttgcgccaggaacgaaataa
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