Tenacibaculum retecalamus: PG912_12975
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Entry
PG912_12975 CDS
T08858
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
trt
Tenacibaculum retecalamus
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trt02000
]
PG912_12975
Transporters [BR:
trt02000
]
Other transporters
Pores ion channels [TC:
1
]
PG912_12975
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CBM_5_12
Flg_new
Motif
Other DBs
NCBI-ProteinID:
WBX71105
LinkDB
All DBs
Position
complement(2754553..2757015)
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AA seq
820 aa
AA seq
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MKQVITLFFLLTITTIFSQNLTIIDAETGKTIDGVAVFNKNKTTSAISNINGIVNVSEFK
DKEILVFSHVGYADFQETKLALKQNEYQVFLSKQSEQLDEIVVSVFKSKAKANRIAEQIA
VVSLKDIQKVSPQTSADLLATIPGIKVQKSQFGGGSPVLRGMESNRVLLVVDGVRMNNAI
YRKGHLQNSITVNPTLLDRTEVVFGPSSVIYGSDALGGVIHYYTKTPKLSEENKIKGSSF
LRYSSVNNEVTNSVSAELQLKNWASLTSITHSNFGDLKMGKNRSHGFDDWGKTFFYSDNL
KGNYTENPTKNEDVNLQRNTGFSQTDFLQKFFIPLSKKTDLKVNIQYSTSSDVPRFDKLS
ELKSGELKFAEWHYGPQSRFLASSQLEINPNKKWLDRGTITAAYQNIEESRIQRKFGSLE
RSYRRENVNVFSVNGDFTVPLAEKRDLGYGFEVAYNDVKSDSYGKTLRINNNEIVDFEGD
FSVQSRYPDGGSSYFSSAMYLDYRQDVTPKSTLNTGIRLTNTQLDAKWIDETFIKLPSST
INLNNTALTATIGYVYKPVRTWQLNAVLSSGFRSPNIDDVGKVREKNGKVTVPNITLKPE
HAYSAEVGFQKYFNDRKFRIGANVYYTLLNNYIYREAFELNGSPTVSYDGENGDIVANVN
KGTAYITGATVSYQGKLLENWSTSGFLTYTKGKAYDTNLPMSSIPPLFGRFELNYSNNKF
EGGANFVFNAKKDITDYNLDEGIDNQQQTPIVNEVATEDVDKYYGTPSWMTVGLHAKYSV
NDNITIQTQLTNLLDEHYKEFASGVSAPGRNISVSILTNF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagttattaccctattttttttactgacaatcaccactattttttcacaaaac
cttacgataattgatgccgaaacaggtaaaacaatcgatggagttgcagtgtttaataaa
aacaaaacaacatcagcaattagtaatattaacggaattgtaaatgtttctgaatttaaa
gacaaagaaattcttgttttttcgcatgttggatatgcggatttccaagagacaaaattg
gctttaaaacaaaacgaatatcaagtttttttatcaaaacaatcagagcaattagatgaa
atagttgtgtctgtttttaagagtaaagcaaaagcgaatcgtattgcagaacaaatagca
gtagtttcattaaaagatattcaaaaagtatctccacaaacatcagcagatttattagct
accattccgggaattaaagttcagaaatcgcaatttggtggcggaagccctgttttaaga
ggaatggaaagtaaccgtgttttattggttgttgatggtgttagaatgaacaatgcaatt
tatagaaaagggcatttacaaaactcgataactgtaaatcctactttattagatagaaca
gaggttgtttttggaccatcatcggttatttatggttctgatgcactaggtggtgtgatt
cattattatacaaaaactccaaaactgtctgaagaaaataaaattaaaggaagtagtttt
ttaagatacagttcagtaaataatgaagttaccaattcggtatcggcagaattacaactt
aaaaattgggcatcgcttactagcataacacatagtaattttggtgatttaaaaatgggt
aaaaatcgttctcatggttttgatgattggggaaaaacgtttttttattctgataattta
aaaggaaattatactgaaaatccaacgaaaaatgaagatgtgaatctgcagagaaataca
ggttttagtcaaacagattttttacagaaattttttattccgctatcaaaaaaaaccgat
ttaaaagtaaatattcaatattctacatcatcagatgtgccaaggtttgataagttaagt
gagcttaaaagcggagaattaaagtttgcagaatggcattacggacctcaaagtcgtttt
ttagcttcttctcaattagaaatcaatccgaataaaaaatggttagatagaggaacaatt
actgctgcttatcagaatattgaagaaagtcgtattcaaagaaaattcggaagtttagaa
agatcatatagaagagaaaatgtaaatgtttttagtgtaaatggagattttacggttccg
ttagcagaaaaacgtgatttaggatatggttttgaagttgcttataatgatgtaaaatca
gattcttatggtaaaacattaagaataaataataacgaaattgtagattttgaaggtgat
ttttcggtgcaatctcgatacccagatggcggaagtagttattttagttcggcaatgtat
ttggattatcgccaagatgttacgccaaaatcaaccttaaacacaggtatacgattaacg
aatactcagttagatgctaaatggatagatgaaacatttataaagttaccgagcagtact
attaatttaaataatacagcacttaccgcaaccattggttatgtgtataaacctgttaga
acttggcaattaaatgcggtgttgtcatcaggatttcgctcgccaaatattgatgatgta
ggtaaggtaagagaaaaaaatggaaaggttactgtaccaaacattacgctgaaacctgag
catgcttatagtgcagaagttggatttcagaagtattttaatgataggaaatttagaatt
ggtgcaaacgtatattatacattgttaaacaattatatttatcgcgaagcctttgagtta
aacggaagccctactgtttcgtacgatggagaaaatggtgatattgtagcaaacgtaaat
aagggaacagcttacattacgggagcaacagtaagttatcaaggaaaattacttgaaaac
tggagtacttcaggatttttaacctatacaaaaggaaaagcgtacgatacaaatttacca
atgtcatcaattccgccattatttggtcgtttcgaattgaattattcaaacaataagttt
gaaggaggagccaattttgtgtttaatgcgaaaaaagatatcacggattataatttagat
gagggaattgataaccaacagcaaacaccaattgtaaatgaagttgcaactgaagatgtt
gataaatattacggtacgcctagttggatgacagttggtttacatgccaaatattctgta
aacgataacataacaatacaaacacagcttaccaatttattggatgagcattataaagaa
tttgctagtggtgtttctgcgccagggcgaaatatttcagtttcaatactaactaatttt
taa
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