Takifugu rubripes (torafugu): 101061033
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Entry
101061033 CDS
T02386
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tru01001
]
101061033 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tru04054
]
101061033 (ciita)
Enzymes [BR:
tru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101061033 (ciita)
Protein kinases [BR:
tru01001
]
Serine/threonine kinases: Other
TAF1 family
101061033 (ciita)
Pattern recognition receptors [BR:
tru04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101061033 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
AAA_16
nSTAND3
DUF815
RsgA_GTPase
AAA_22
NB-ARC
nSTAND_NTPase5
ABC_tran
AAA_29
VapE-like_dom
TsaE
AAA_7
Motif
Other DBs
NCBI-GeneID:
101061033
NCBI-ProteinID:
XP_011602128
Ensembl:
ENSTRUG00000022092
LinkDB
All DBs
Position
5:5666914..5677887
Genome browser
AA seq
1376 aa
AA seq
DB search
MEPLSQNCTWPLCKVCPDCAINRCSQIRVEHAPAAMDSSRHDCCYSWFHDKTKELPRSLA
PSRTDCGGLNEGNLEHVAGRLTIPLWQNWDRGHKLLLPLIAPVEPVGTTSQSRAAATDTV
WSVDAETELAFALAPFGVNMEGFPPDQGGIAKGPESSENPKMPGLGRVLHGEEGGPDTEV
LETHFSMTPDNLGWMSSGLGSFGSAEGSPGAKMQDEQENLPTCPDLADPGTRMQDVDEVP
NMSLEFGDLPEDLSEFLNEQYIVDPEVLLGDPLWNYEEGPSKPGASSEPHDSGSLRENQE
AKQAHKTEKRAKPLNGPEPQPPSDDNTPCKRQRVTDTDQELELGLSDCLTTPPRVLQLHP
PMHLITIPDPPLYQVVHALSISSPVITIPCSPLTSTFILVPASSPPKSLHPSPLSPADGT
VAPVQMSSSPPGSLSDTASRAVSPPHASPPSPINEGVRVYILEAKAHMSQSCEVIKGGLT
LSSHYVDVQVSQREIVYRCGKNTNKVQDKELIFNGDAHRQKSLLDQSQIFDGSLGDNPKR
YILLMGDAGMGKSTLIKKLCLNWSKDHFPQFDFVFLLDGKMLALTKPIFSLQTLLLNFSS
FATACFDPDAVFAQVMAAPKRVLIIFDGFAEVRDFETLLQTQEKDLSASLQKDSKAQTYT
IKQLFAGILQRAVLRGCTLVLSTRPRGAASQVLRRTDSYLEVCGFSVPDVETYVSRYFTD
PTLRESALEHLKSHRYLHLLCWNPGLCRLVCSVLEGSKNIRELPRTLTELCRQVLDLRVK
GCSPAFTFTPSSVKPENTVEAKEGSSSSEGRVQPVDVQPQSSESAAKEGEEEKAEEATGV
EEGEEPQELLSQLSCLAWDGVKSHTSVIPDGKYVSPRLKAFGLRTGLLDCHDLRTTHLIS
SGEIKGGGGKAKGQKKTRKKVCEENATGREPAKEHILLWANPYLQSYLAALHLCLSRVVS
HRTFFKSLPLLSGPKSCRRCQREVLELTQRFAFGILMEKLETLDAEASLRDALVAKQTLL
TKHLEDLSHGGLSPAQLLQACHYVYEVSLIRGSPSTDGSDTELKRQSKLPEVLAFRGVPI
DPLDAFVVWHVLERAGQEGHSFSLDLEDSGIQISGLRALVGLSNINTYRACIADVVTLWE
QLKQSGEESLLQRAVSKFKIHPLKASQVCHIEHLAKLVNVHMQKRFPNSSSQSDPILAEG
VPAVTGLHRLELELGPDKGSKALPKLWELLPGLHNLEHLDLENSKIGDRGAENLADALVS
LRLLEVLNLSQNCIGDKGMKKLAITLRDLPKLHCLSLYSNMISDEGAKSLAAVLPYMASL
TDLDVKYNELTDVGAESLGASLKKCKNIKTLRMWNQLIPCRVFERLRTQDNRILWH
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggagccgctcagccaaaactgcacttggcccctctgcaaggtgtgtccagactgtgcc
atcaaccggtgcagccagatcagagtggaacacgccccggcagcgatggacagctccagg
catgactgttgctacagttggttccacgacaaaacaaaagagctgccaagaagtttggcg
ccgtctcgcaccgattgtggggggttgaatgaggggaatttggagcatgtggctggaaga
ctaaccatccctctgtggcagaactgggacagaggacacaaactcctgctgcccctgata
gctcctgtggaaccagtcgggaccaccagccaaagcagagcagcggctaccgacaccgtt
tggagcgtcgatgctgaaacagagcttgcgtttgctctcgcgccatttggggtgaacatg
gagggcttccccccggatcaaggcggcatcgcaaaagggcccgaatcctctgaaaacccg
aaaatgcctggactgggtcgcgtcttgcatggtgaagagggcgggccggatacagaagtg
ttggagacccatttcagcatgacgccagacaacctgggctggatgagctctggcctggga
agttttggaagtgctgagggatcaccaggtgccaaaatgcaggatgagcaagaaaacctg
cccacctgccctgaccttgcagatccaggaaccaggatgcaggatgtggatgaagtgcca
aacatgtctctcgaatttggagatttaccagaagatttgtccgaattcttgaatgaacaa
tacattgtcgatccagaagtgctgttaggcgatccactgtggaactacgaagagggcccc
agcaagcccggtgcctcgtcggagccgcacgactctggtagcctccgggagaaccaggaa
gctaaacaagcacacaagactgagaaaagggccaaaccactcaatgggccagagccgcag
cccccctctgatgacaacactccatgtaaaaggcaaagggtaacagacaccgaccaggaa
ttggagctgggtctatcagactgcctcaccacgcctcccagagtccttcagctgcatcct
cccatgcacctgatcaccatcccagaccctcctctgtatcaggtggtgcatgccctgagt
atctcctctccagttattacaatcccatgctcccctttgacttcgactttcatacttgtt
cctgcctcctcgccaccgaaatcccttcacccttcaccactctcaccagcggacggtaca
gtagcaccggtccaaatgagttcgtccccaccaggatctctgtcagacactgctagcaga
gctgtgtcccccccacacgcttcacccccctcccccataaacgagggtgtaagggtctac
attcttgaagcaaaggcgcacatgagtcagagctgtgaggttatcaagggaggccttacc
ctgagttcgcattacgtcgatgtgcaagtcagccagagagagatcgtctaccgatgtggg
aaaaacaccaataaagttcaggataaggagcttatttttaacggcgatgcccaccggcag
aaaagcttgttggatcagagtcagatcttcgacggctcactcggagacaatcccaagcgc
tacatattgctaatgggcgatgccggtatgggaaaaagcaccctgatcaagaagctgtgc
ctcaactggtctaaggatcatttcccgcagttcgattttgtcttcctgctggacgggaaa
atgctggctttaacaaagcccatcttcagcctccagaccctcctgttgaacttctcctcc
tttgctaccgcctgctttgacccagatgcggtttttgctcaggttatggcggcgccaaag
cgggtgctcattattttcgacggctttgccgaggtgcgggactttgagacgctgctccag
acacaggaaaaagatctgagcgcgtcgctgcagaaagacagcaaagcgcagacatacacg
ataaaacagctgtttgcaggcatcctccagagggcggtgcttcggggttgcactcttgtg
ctctccacgcgacccagaggtgctgctagccaggttctacgacgcacagacagctatttg
gaggtgtgcggtttctccgtccctgacgtggagacgtacgtgtctcggtacttcaccgat
ccgaccctcagggaatctgccttggagcacttgaaaagccacaggtacctgcatctcctc
tgctggaaccccggactttgtcgtctggtgtgctctgttttggaagggtcgaagaacata
agagaattgcccagaaccttgactgagctctgccgccaagtgctggacctgagagtgaaa
ggatgttcgccggctttcaccttcacaccgtcgagtgttaaacctgaaaacactgtggaa
gctaaagaaggctcaagcagctctgaagggcgggtgcaacctgtagacgttcagccccaa
agctcagaaagtgcagcaaaagagggggaagaagagaaggcagaggaggcaacaggtgtt
gaagaaggtgaagaacctcaagagttactgtcccagctgagctgcttggcctgggacgga
gtcaaatcgcacacctccgtcattccagacgggaaatatgtatctcctagactcaaggca
tttggcctgaggactgggctgctggattgtcatgatctgaggacgacacacctcatctca
agcggggagataaagggaggaggtgggaaggccaaaggacagaagaagaccaggaagaaa
gtttgtgaagaaaacgcaacaggaagagaaccagccaaagaacacattctgctgtgggcc
aatccttacctgcagagctacctggcggcgctccatttgtgcctgtcaagggtggtttca
catcgcactttcttcaagagcctccctctcctgtcgggcccaaagtcctgccggcgctgc
caacgggaagtgctggagctcactcagcggttcgcttttggaattttgatggaaaagcta
gagacactcgacgctgaggccagtctcagagacgcgctcgtcgccaaacagactttattg
accaaacaccttgaggatctctcacacggcggcctgagtccggctcagcttctgcaggct
tgccactatgtttatgaagtgagtttgatacgtggcagtccgagcacggatgggagtgac
acagaattaaagcgtcagtcaaagctaccggaggtcctggcgtttcgtggcgttcccatc
gaccctttggatgcctttgttgtgtggcatgttctagaaagagcaggccaggaaggtcac
agtttcagtttggatctggaggattctgggatacagatttcaggactcagagccctcgtg
ggcctcagcaacatcaacacctacagggcctgcattgccgacgtcgtcaccctgtgggag
cagctgaagcagagcggtgaggagagcctcctacaaagagcagtgtccaaattcaagatt
caccctctgaaggcctcccaggtttgtcacatagagcacctggcaaagctggtgaacgtg
cacatgcagaagaggttcccaaacagcagcagccagtcagatccaatcctggctgagggg
gttccagccgtgacaggcctgcacaggctggagttagagcttggtccagataaaggttca
aaggctcttcctaagctgtgggagctcctgccaggtctacataatctagagcacttagat
ttagagaacagcaaaataggggacagaggagcggagaatctggccgatgctctggtatca
cttcgtttactggaggtactcaatttgtctcagaattgcattggagataaggggatgaag
aaactggccatcacactacgagacctccccaagctgcactgtctgagtctctacagcaac
atgatttctgatgaaggggcaaagagtttagcagctgttctgccctacatggcatccctc
actgaccttgatgtaaagtacaacgagctaaccgatgttggagcagagagcctgggagcc
agtctgaaaaagtgtaagaacataaagaccctgaggatgtggaaccagctcattccatgc
agagtgtttgagaggctacggacgcaggacaacaggatcctttggcattag
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integrated database retrieval system
