Takifugu rubripes (torafugu): 101061178
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Entry
101061178 CDS
T02386
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03013
Nucleocytoplasmic transport
tru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101061178 (rnps1)
03015 mRNA surveillance pathway
101061178 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101061178 (rnps1)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101061178 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_10
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
101061178
NCBI-ProteinID:
XP_011602289
Ensembl:
ENSTRUG00000008602
UniProt:
H2TA89
LinkDB
All DBs
Position
5:8303514..8306080
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AA seq
282 aa
AA seq
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MAPSPTKRKEEEKTKDRGKEKTSNKDGEKDRGREKARKRRSASSGSSSSTSRSRSSSTSS
SSSGSSSGSSSGSSSSGTSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSVSKTQKR
GEDKERRKRSPSPKPTKIHLGRLTRNVTKDHIQEIFTTYGKIKSVEMPMDRLHPHLSRCS
AYIEFETPEEAQKALKYMDGGQIDGQEITASAVLTQRVRPPPRRLSPPRRMPPPPPMWRR
SPPRMRRRSRSPRRRSPARRRSRSRSPGRRRHRSRSSSNSSR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcccccacaaagaggaaagaagaggaaaaaactaaagacagaggtaaagaa
aagaccagtaacaaggatggagaaaaggaccgtggacgggagaaagcacgcaaacgtcgc
agcgcttcttctgggagcagcagcagcaccagcaggtccaggtcgagttctacttcgagc
agcagctcgggctccagctcagggtcctcgagtggatccagctcatccggcaccagccgc
tcaggttcctcaagctctcgttcttcgtcctcttccagttcttcgggctcccccagcccg
agccgtagacgccacgataaccgcagacgctcccgttcagtgtctaaaacacagaaaaga
ggagaggataaagagaggaggaaacggagcccgagcccaaaaccgactaaaattcacttg
gggcggctgacccggaacgtgaccaaggatcacatccaggagattttcaccacgtatggc
aagatcaaatcagtggaaatgccaatggacagactgcacccacacctgtccaggtgctcc
gcctacatcgagtttgagacccctgaggaggcccagaaggccctcaagtacatggatgga
ggtcagatcgatggtcaggagataacggcctccgccgtcctgacccagcgggtccgccct
ccccctcggagactttctccgccccgtagaatgcctcccccgccgcctatgtggcgcagg
agccccccgcgcatgagaagaaggtctcgctccccgaggaggcggtccccggcacggcgc
cgctctcgctccagatcacccggtcgcaggcgccatcgctctcgttccagctccaactcc
tccagataa
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