Takifugu rubripes (torafugu): 101061384
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Entry
101061384 CDS
T02386
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03013
Nucleocytoplasmic transport
tru03015
mRNA surveillance pathway
tru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101061384
09122 Translation
03013 Nucleocytoplasmic transport
101061384
03015 mRNA surveillance pathway
101061384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101061384
03041 Spliceosome [BR:
tru03041
]
101061384
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101061384
Spliceosome [BR:
tru03041
]
Complex C
Other components
EJC/TREX
101061384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
HeH
Motif
Other DBs
NCBI-GeneID:
101061384
NCBI-ProteinID:
XP_011617213
LinkDB
All DBs
Position
22:complement(13297642..13307424)
Genome browser
AA seq
1576 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNTLIKRLKGALMLENLHRTSTAH
VGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLERESCEVYDTNEQEAHREVNNSTSCP
PQVQDVAPALDEQHKPPGPSAEGFSGANEREANQNRDADVPSPASGSVATSVPGGEQWPE
RHPSSNEVGADSDDEDSDEGEEDGEDDDWNSGGGRRSLRQPTRGPLTRERSGASYQPQQQ
QQHMPSLLSPQLRQPTPPPSPPPEFNFPLPDTPKQSPPSPEVAPPRRSPSSSSSGSSSSD
SRSSSPEPQSGSGSVERKPGPLTLLARKMASEGAFSGVGWHSGEGNGDRQDTSSVAASSF
PGRGPPEGLVSAITHTANTSGPVSFPMFPATSQGDGVQSTHIQVPVSVLKATATEERNRR
GCSETEHTERQERQRIAEQEQAMEEEGERNLALLRAEKERALERERIEKQQALEKEEQER
ALQLERELALDRERQEKELALVKEREEQELALAREKALELERQRELERQEVERQKELERQ
RELERQEVERQKELERQRELERQEVERQKELERQRELERQEVERQKVLEQERIQREKERE
KQEREEMERALQQERERALEQERLERERIMEAARIERQMALEQERIEKEKALEEKRLEME
RIENEKAQERLERERASEQERIAMEEKEKAAAEKKLEQERALEEERKEAERECDRVEKDK
AMQEQARALEMADKEREIHLPQSKRKCEVGLTPLPTPPSLSTGPGRKSPTDAGEQEDVSS
SRKDASGAPTSPSASPQSAFKKFRFLRESHIPPQSSSPSVVIKRPRKFSDAPLSSAASPD
VAQQQQEGLGPDDKKQEEPVKVEEAATEKREAEESQELSSAAETAQRRGRDANKEEKQAR
KRSSSRDSSSSESDSGSSSSGSSSSSTSSQDKSSSSSRSRRDGRNERGPSPHRRKRLGSQ
LQELQNESQKAPPRKSELSAARSDTTPDDSCAKAQKRLIDEPREEMQKKRKVSEAEEEKD
EQRQLKEAVMAESEKTSESCEETPKAFSARKISLGSSKSSPGTGSTEGEQDCGAAAGRKR
RWGSSTTVTAKKPSISITTDSLKSLIPDIRPSLGQEAVVDLHPEEAVLSGAEDEEQEHSD
PDLQIRRTVTQVVHSESQENGQKEAKRSKYEDEEELQADEVSKEQEEKMDTSSPGATETK
FPPDTSREINTGSESQVAPSDTLVRRSISQQRTGVSITIDDPVRTARQPSPPRGKVSCIV
HISNLVRPFTLGQLKELLSRTGTLVEEGFWIDKIKSHCYVTYCSSEEAVATRAALHGVKW
PQSNPKVLRVDFCEQDELDFHKGLGTADKPGAEEQGPDSDRGRAAALPSLFLDRDQWAER
EREMERREKARAEREWDRDKVREFGKPVDEKEGGPRRSRSRERRRKERGKSKEKKGEKKE
KPEEPPAKLLDDLFRKTKAAPCIYWLPLTEEQFVEREAARAERMKEREKRTKEREKQRKE
QEEEEEKKREEERKERMKAAGDRSEGEKDRERERDRGRDRERDNDKRRDGYRRPGGSGAG
GGRRSRSRSDPRERRR
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcgaagacgttaccctggatgggagaccgctccagtcccttcgagtagcg
gatttaaaagctgctcttgaggagaggggactctcaaaaagcgggcagaagaatactctc
ataaaaagactaaagggggctctcatgttggagaatctgcataggacctccacagctcat
gttgggctgcaaccaaactcccagattggtgaggaaatgagccagaacagttttatcaag
cagtatctggctaaacagcaggagctcctgaggcagcgtctggaaagagagagttgtgaa
gtgtacgacacaaatgaacaagaggcccacagagaggtgaataacagtacttcatgccca
cctcaagtgcaggatgtcgcaccagcattagatgaacaacacaagccacctgggccttct
gcagagggattcagcggagccaacgagagagaagctaaccagaaccgggatgctgacgta
cccagtccggcttcaggttctgtagccacaagtgttcctggtggtgagcaatggccagag
agacatccttcatctaatgaagttggtgccgacagcgacgatgaggatagtgatgaaggc
gaggaggatggcgaagatgatgactggaacagcggtggtggcaggagaagcctcagacag
ccaaccagagggcccttgaccagggagaggtctggagcatcctatcaaccccagcagcag
caacagcacatgccttctctcttgtccccccaactccgccaacctacgcctcccccttcc
ccacctccagaattcaatttcccattgcccgacactcctaaacagagcccccctagtcca
gaagtagccccacctaggcgctcacctagttcctcaagctccggttcctccagcagtgac
agtcgcagtagcagcccagagccacagagtggaagcggaagtgttgagcgcaaacctggg
cccctgacccttctggcacgtaaaatggcatcagaaggggcattttcgggagtaggttgg
cacagtggtgaggggaatggtgacagacaggataccagttctgtcgcggcctcatcattt
cctggcagaggacctccagagggtctggtgtctgcaatcactcacacggccaacaccagt
ggccctgtttcatttcccatgtttccagccaccagccagggtgatggagtacaatcgacc
catattcaagtacctgtgagtgtgctcaaagccactgcaacagaagaaagaaacagaagg
gggtgtagtgagacagaacacactgaaagacaggagagacagagaatagctgaacaagaa
caagccatggaggaagagggggaaagaaatcttgcactgctaagagccgaaaaggaaagg
gctctagaaagagagcgaatagaaaaacagcaggcattagaaaaggaagaacaagaaagg
gctttgcagctggagagagaactggctcttgacagagaaagacaagagaaggaattagct
ttggtaaaagagagagaagaacaagagctagccttagcaagggaaaaggccctggagctg
gagaggcagagggagctagaaagacaggaagtagagaggcagaaggaactggagaggcag
agggagctagaaagacaggaagtagagaggcagaaggaacttgagaggcagagggagcta
gaaagacaggaagtagagaggcagaaggaacttgagaggcagagggagctagaaagacag
gaagtagagagacaaaaggttctggaacaagaacgtatccagagggaaaaggagagggag
aagcaagagcgggaagaaatggaaagagcgctgcagcaggaaagagaaagagctcttgaa
caagagagattagagagggaaagaataatggaggctgcaaggattgagagacagatggct
ttagagcaagaaagaatagaaaaagaaaaggcccttgaggaaaagcgcctagaaatggag
agaatagaaaatgaaaaagctcaagaacgattggagagggagagagcatctgagcaagag
aggatagcgatggaggaaaaagagaaagcggcagctgagaaaaagctagaacaggagcga
gcactggaggaggagaggaaggaagcagagagagaatgtgacagggtggaaaaggacaaa
gctatgcaggagcaggccagagcccttgaaatggctgacaaggagagggagattcacctc
cctcaatccaaacgtaaatgtgaggttggtctcacccccctgcccactcctccctccctc
tctacaggaccaggtagaaagtcaccgacagatgctggagagcaggaagatgtttcctct
tcacggaaagatgcttctggtgcacccacatcaccatcagcctcccctcagtctgcattc
aagaagttccgtttcctaagggagtcacacattccgccccagtcttcctccccttccgtc
gtgatcaagcgaccccgaaagttctccgatgctcccctctcatctgccgcctctcccgat
gttgctcaacagcagcaggaaggcctgggccccgatgacaagaaacaagaggagccagta
aaggtggaagaagctgccacagaaaaaagagaagcggaggaaagccaggagctttccagc
gcggcggagactgctcagaggaggggaagagatgcaaataaggaagagaagcaagcgagg
aaaagatcgtcgtcgcgcgactcctcctcctcagagtccgactccgggtcctcgtcgtcg
ggctcctcgagctcgtccacgtcctcccaagacaaatcgtcctcctcttcaagaagtaga
agagatggcagaaacgagaggggtccgtcaccacatcgcaggaagagactggggtcccag
cttcaggaattacaaaatgaaagccaaaaagctcccccccgtaagagcgagctgtccgcg
gcgaggagcgacacaactcccgacgacagttgcgcaaaggctcagaagcgtttgatcgac
gaaccgagggaggagatgcagaagaagagaaaggtcagcgaagcggaggaggaaaaggac
gagcaaagacaattgaaggaagcagtcatggcagaatcggagaagacttctgagtcctgt
gaggagacaccaaaggccttttcagctcgcaagatttctcttggcagcagcaaatcatcc
ccaggcacggggagcacagagggcgagcaagattgtggggctgcagctggtcgtaagagg
aggtggggctcaagcacaacagttactgccaagaaaccttccatcagcatcaccacagac
tcgctcaagtctctgatcccggacattcggccgagtctcggccaggaggcagtcgtggac
ctgcacccagaggaggctgtcctgtccggagccgaggacgaggagcaggagcattctgac
ccggaccttcagatccgacgaactgttacacaggtggtgcactctgagagtcaggagaac
ggacagaaggaagcaaagagaagtaaatacgaggatgaggaggagctgcaggccgacgag
gtgtcaaaggagcaggaagagaagatggacacctcgtctccaggtgccacggaaaccaag
ttcccaccagacaccagccgcgaaatcaacactggtagcgaatcgcaagtcgctccgagt
gacacgctcgtccgtcgctccatcagccagcagagaaccggagtctccatcacaatcgac
gaccccgtccgcacagcccggcagccctcgccgccccgcggcaaagtctcctgcatcgta
cacatcagtaacctggtgagaccgttcaccctcgggcagctcaaagaactgctcagccga
acgggcaccctggttgaggaaggcttctggatcgataagatcaagtctcactgctacgtt
acttactgcagctcggaggaggctgtggccacgcgagcggctcttcacggcgttaagtgg
cctcagagcaacccaaaggtgctcagagtggacttctgtgaacaggacgagctggacttt
cacaaaggcctcggtacagctgacaaacccggagcagaagaacaagggcccgactccgac
cgcggccgggcggcggctctgccctctctctttctggacagagaccagtgggccgagcgg
gagcgtgagatggagcgccgggagaaggcgcgggcggaacgcgagtgggatcgcgataag
gtcagagagttcggcaaaccggtggacgagaaggagggaggtccccggagatcccggtcc
agagagagacgacgcaaggagagggggaagagcaaagagaagaagggtgagaagaaagag
aaacctgaagaacctcctgcaaagctgctggacgacctgtttcgcaagactaaggcggct
ccttgtatatactggcttcctctcacggaggagcagttcgttgagcgggaggctgcccga
gccgagcggatgaaggagcgcgagaagcggacgaaggagcgcgagaagcagaggaaggag
caagaggaggaggaggagaaaaaaagggaagaggaacgcaaggagaggatgaaggccgcg
ggcgatcggagcgagggcgagaaggacagagagagggagagagaccggggtcgggacagg
gagagggacaatgacaaacgcagggatggctaccgtaggcccgggggcagcggagcgggc
gggggccggcgctctcgcagccggagcgacccgcgagagcggcggcgttaa
DBGET
integrated database retrieval system
