Takifugu rubripes (torafugu): 101061948
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Entry
101061948 CDS
T02386
Name
(RefSeq) structure-specific endonuclease subunit slx1-like isoform X2
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101061948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tru03400
]
101061948
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101061948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
101061948
NCBI-ProteinID:
XP_011604881
Ensembl:
ENSTRUG00000025864
LinkDB
All DBs
Position
8:complement(11071216..11074288)
Genome browser
AA seq
282 aa
AA seq
DB search
MTFLFSVFWLNTKTVCFLIIMVVVVESFFGVYMLYCTNPKYKGRIYIGFTVNPERRIKQH
NAGRHKGGAKRTSGRGPWEMLLIIHGFPSDIAALRFEWAWQHPHSSRHLSHVCKRSRKES
SLQFHWRVVSNMLLVAPWNRQPLTTRWLKQEFMMDFEPNLQPPMHIPIALGSVTAKKSQQ
VDLSSEQGELLKCFLCKGLIKGPEKLSCFHPSCNMCSHVICLARRFLKSAPSHLLPVEGE
CPSCYKALLWGTLIRRKNGCFGDLEATVPSSYSTDWTDELQI
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttttatttagtgttttttggctcaatacgaaaacggtttgttttctaataatt
atggttgtcgtagttgaaagtttcttcggggtgtacatgctgtactgcaccaatccaaaa
tataagggccgtatttacatcggctttactgtgaacccagagcgcaggatcaagcagcac
aacgctggacgacacaaggggggagccaaaaggacaagtggaaggggaccatgggagatg
ctccttattatccatggctttccatcagatattgcggccctaaggtttgaatgggcatgg
cagcacccccactcctcaaggcacctctcccatgtctgtaagcgctccaggaaggagtcg
agcctacagttccactggcgcgttgtctctaatatgctactggtggctccgtggaacagg
cagccactaacaacccgttggttgaaacaggagttcatgatggactttgagcccaacctg
cagcctccaatgcacattccaattgctttagggagtgtgacagcaaaaaagtcacagcaa
gtggatttgtcgtcggagcagggggaactcctcaagtgcttcctttgtaaaggtttgatt
aaggggccagagaagctcagctgtttccacccatcctgtaacatgtgcagtcatgtgatc
tgccttgccagacgtttcctgaagtcggcgccgtcccacctcttgccagtggagggtgaa
tgcccatcatgttataaagctttgctctgggggactcttatccgccgtaaaaatggctgc
tttggagacctggaggcgaccgtgccgtcatcatacagtacagactggacggatgaactt
cagatatga
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