Takifugu rubripes (torafugu): 101061978
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Entry
101061978 CDS
T02386
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101061978 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101061978 (thoc5)
03041 Spliceosome [BR:
tru03041
]
101061978 (thoc5)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101061978 (thoc5)
Spliceosome [BR:
tru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101061978 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF2542
Motif
Other DBs
NCBI-GeneID:
101061978
NCBI-ProteinID:
XP_011614088
Ensembl:
ENSTRUG00000016363
UniProt:
A0A674PFK1
LinkDB
All DBs
Position
21:14036642..14042239
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AA seq
684 aa
AA seq
DB search
MSSDTLKKRKSKVLRGEGAVQEMKRGRVEGDQQEIRVYSEEVELDSRDAKQDYKQFKESC
DSLANLMSEIQNLKANGAKEGCVEVEQKRMQSCILFMNLKKLNRLTHIRLKRGRDQTHEA
KQRVDVLHLQLQNLLYEVLHLQKEISKCLEFKSKHEEIDLVPEEEFYKDAPPDISRPNLT
KTDSHQLTLARLDWELEQRKRLAEKYKESLSSKEKIQKSIEVKKEHLSSLQPGLTAIMQA
SIPVQQYLSMPFEQTQKQTEVARHLPPPLYVLFVQANAYGEACDKNLIVSINGDVDEAKA
LSKPQEDSQDDESDSDAEEEQEKTKRRRATTGGQLDDKRREMLKRHPLSLCIDLKCKDGS
ILYLYFYYLMNLNIMTVKTKVSIPTDLNTTISGGDLLKSDTLLSCLYAGDHGGETPNPAN
RYQFDKVSIVCFSDYVEELGHPYMWVQNLGGLQFPVGASESVCSGSSLSASQMEKTMKLL
KRRLQSRLALHRQFASLEHSIIPVSSECLYLFPAKIMSRLVRWVAITYEEYRDLPYTQHV
TDAGLAKETDLYFMGVVERGTACLQAAVVLNPRYPEVSPLFSLSLSWKGERSGQTDDNLR
AMESEVNVFKNELQGPHPGHQLLTNQISRLCVCLDVYLETEGQDDGVEGPREFPREKMCL
RIVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgataccctgaagaagcgaaagtcgaaggttctccggggcgaaggagcggtc
caagagatgaagcgaggtcgcgttgaaggagaccagcaggagatacgtgtgtatagtgag
gaggttgagctggacagcagggatgccaagcaagattacaagcaatttaaggagtcgtgt
gacagtctggctaatctgatgagcgagattcagaatcttaaagcaaacggagccaaggag
gggtgtgtcgaggtggagcagaaacgtatgcagagctgcatcctcttcatgaatctgaaa
aaacttaatcgccttactcacatacgattgaagagaggcagggaccagacgcatgaagcg
aagcagcgagtcgacgtgctgcaccttcaactccagaacctgttgtatgaggttttgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaaacatgaagaaatcgacttg
gttcctgaggaagagttttacaaggacgccccgccagacatttcaaggcccaacctcaca
aaaaccgattcccatcaactcacactggcacgactggactgggagcttgaacagaggaag
aggctggcagagaaatacaaggaatcactgtcctcaaaagaaaagatccagaagagcatt
gaggtgaaaaaagaacatctgtcaagcttgcagcctggactgactgctattatgcaggca
tcaattcctgtgcagcagtatctgtccatgccttttgaacaaacccagaaacaaacagag
gttgcccgccacctcccccctcctctctatgtcctgtttgttcaagctaatgcctacggc
gaggcctgtgataaaaacctgattgtttccatcaatggtgacgtggatgaggccaaggct
ctatccaaacctcaagaggattcccaggatgatgaaagcgattcagatgcagaggaagag
caggagaaaacgaaacggagacgagccactacaggtggccagctggatgacaaaagaagg
gagatgctgaaaaggcaccctctgtctctctgcatagatctcaagtgtaaagatggcagc
atcctttatctttacttctactatctgatgaatctgaacatcatgacagtgaagaccaaa
gtgtccattcctacggatctcaacacaaccatcagcggaggggatttgctgaaatcagac
actctgctcagctgtctgtacgccggtgaccacggaggagaaacccccaacccggctaat
cgctaccagtttgataaagtcagcattgtttgcttcagtgattatgtggaggaactcggc
catccctacatgtgggtccagaacctgggaggactgcagtttccagtgggtgcttcggag
agtgtttgcagtggcagctccctgagtgccagccagatggagaaaaccatgaagctgctc
aagcgacgactccagtcccgcttagctttacaccgacagttcgcctcactggagcacagc
atcatcccggtctccagtgagtgcttgtacctgttccctgctaagatcatgtcccggtta
gttcgctgggtcgctatcacctatgaagagtacagggacctgccttatacacaacatgtc
actgatgctgggctggcaaaggagactgatctgtattttatgggtgtggtggagaggggc
acagcttgcctccaggccgccgtagtgctgaatccccgttacccagaggtctctcctctg
ttctccctgtccctcagctggaagggggagcgtagcggacaaactgacgacaacctcagg
gctatggagagcgaagtgaacgtgttcaaaaatgaactacaggggccgcatccgggtcac
cagctcttgaccaatcagatctcacgtctctgtgtctgtttggacgtgtacctggagact
gaagggcaagacgatggcgtggaggggccgagagagttcccgcgggagaagatgtgtcta
cgcatcgtgaggggacccaatcgtctgaagccgttcaagtacaaccaccctcagggcttc
ttcagtcaccgttag
DBGET
integrated database retrieval system
