Takifugu rubripes (torafugu): 101062011
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Entry
101062011 CDS
T02386
Symbol
rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X2
KO
K08524
retinoid X receptor alpha
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03320
PPAR signaling pathway
tru04148
Efferocytosis
tru04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101062011 (rxra)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
101062011 (rxra)
03320 PPAR signaling pathway
101062011 (rxra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101062011 (rxra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tru03310
]
101062011 (rxra)
Transcription factors [BR:
tru03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
101062011 (rxra)
Nuclear receptors [BR:
tru03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
101062011 (rxra)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
101062011
NCBI-ProteinID:
XP_003965202
Ensembl:
ENSTRUG00000006349
UniProt:
A0A674PLN8
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Position
6:complement(3770115..3842174)
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AA seq
496 aa
AA seq
DB search
METKPFLSLGFLKPQCSLAPPMDRGRSAEACSCFSGMCPLHQRRLASDSMGHVNSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGLASPFSVISSPMGPHSMNSPGMGY
GASVSPQLNSPMNSVSSTEDIKPPLGINGVMKVPAQPSGTSLSLSKHICTICGDRSSGKH
YGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREAVQ
EERQRAKDKNENEVESTSCASEDMPVEKILEAEQAVEPKTETYIETNLSVPSNSPNDPVT
NICQAADKQLFTLVEWAKRIPHFSELALDDQVILLRAGWNELLIASFSHRSIGIKDGILL
ATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNP
SEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTP
IDTFLMEMLEAPHQMT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaacctttcttgtcattggggttcctcaagccccagtgctcactggctccc
ccgatggacagaggtcgctcggccgaggcctgttcctgtttcagtggcatgtgtcctctc
catcagcgccgcctagcctcagactcgatgggccacgtgaactcctcccccctgggctca
cccacatcccaccgagggatgcacccctcgctgctcagcccgacctccatgggaccctcc
ggctcgctccactcgcccatcagcacgctgagttcgcccatgaacggcctggcatcgccc
ttctccgtcatcagctcgccaatgggcccccactccatgaactcgcccggtatgggctac
ggcgccagcgttagccctcagctgaactcgccaatgaactcagtcagcagcactgaggac
attaagccaccgttgggcatcaatggtgtgatgaaggtgcccgcgcagccctcaggcacg
tcactgtcactcagcaaacacatctgcaccatctgtggtgaccggtcctcaggtaaacac
tacggggtatacagctgcgagggctgtaaaggcttcttcaaaagaacggtgcgcaaagac
cttacatacacctgccgtgacaacaaggactgtgtcattgacaagcgccagaggaaccgc
tgccagtactgccgctaccagaagtgtttagccatgggcatgaagagagaagccgtccag
gaggagcgtcagagagcgaaagacaaaaatgagaacgaggtggagtccaccagctgtgcc
agcgaggacatgcccgtggagaagattcttgaggccgagcaggcggtggagcccaaaacg
gagacctacatcgagaccaacctcagcgtgccatcaaactcgcccaacgatccagtgacg
aacatctgtcaggcggctgacaaacagctctttaccttggtcgaatgggccaagaggatc
cctcacttctccgagctggcactagacgatcaggtcatccttctacgagcaggttggaat
gaactcctcattgcgtcattttcgcaccgttcgatagggattaaagacgggatcctgctg
gcgacggggctgcacgttcatcgcaacagcgcccacagcgctggagtgggagccatcttt
gacagagtgctcacagaactggtgtcgaagatgagggacatgcagatggataagacggaa
ctggggtgtcttcgagctattgtccttttcaacccagactctaaaggcctgtccaacccc
agcgaggtagaagctctgcgagagaaagtgtacgcatctttagaggcttactgcaaacac
aagtaccccgaacagcctggcagattcgccaagctgttgctgcggttaccggcgctccgc
tccatcggcctcaagtgcctcgagcacttgttcttcttcaagctgatcggagacacgccc
atcgacaccttcctcatggagatgctggaggccccgcatcaaatgacataa
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