KEGG   Takifugu rubripes (torafugu): 101062027
Entry
101062027         CDS       T02386                                 
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru04510  Focal adhesion
tru04512  ECM-receptor interaction
tru04518  Integrin signaling
tru04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101062027 (col9a2)
   04518 Integrin signaling
    101062027 (col9a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101062027 (col9a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101062027 (col9a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tru00535]
    101062027 (col9a2)
Proteoglycans [BR:tru00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   101062027 (col9a2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 101062027
NCBI-ProteinID: XP_003969086
UniProt: H2UPW9
LinkDB
Position
12:complement(4587905..4601111)
AA seq 691 aa
MAALSALLKTWVILQALCLALAQVRGPPGPQGLPGPPGPSGIPGSDGIDGEKGPPGPSGP
PGQKGEPGEPGPDGPLGENGIDGLIGAKGDRGPIGNPGPKGQPGPSGEPGPPGLGLPGLP
GTPGPIGLPGEIGPLGPKGVLGSPGPPGLPGPPGKPGPPGKFIGLEEGSADFQCPLNCPA
GPKGPQGLQGVKGHKGRSGVLGDPGSIGKMGPKGEVGVSGEQGIPGPPGPMGLRGYPGMM
GPKGEAGPRGYKGIRGPVGISGPPGEEGPQGTLGESGDRGDRGSRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGFPGLKGAPGQAGMPGPPGSQGAAGLPGSPGAKGGPGDTGEPGPRGPV
GMSGAPGPLGEPGLPGEAGMEGVPGPKGDRGQRGEAGPQGIVGKSGGKGERGPIGVPGAQ
GLSGTKGDKGFQGKVGSKGDIGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDSGHNGPT
GDPGKPGDPGPPGLPGPRGLNGERGVPGMPGIHGPSGRDASDQHIIEVVLKMLQERLAAV
AVSAKRDVLGGAGVMGPPGPPGPPGPPGSQGQHGLPGPRGIPGFTGGPGQIGNTGLKGKR
GPKGERGDSGKPHPGPPGLPGIQGAPGVDGVARDGRPGERGPQGSPGEAGYPGKAGPAGL
PGYCEAAMCLAASAYTSPRLQEAGTIKGPNF
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggctgctctctctgccttgctgaagacctgggtaatcctgcaggccctgtgtctggct
ctggcacaagtgaggggtccacctggaccacagggtctgcccggcccaccaggcccttct
ggcatccctgggtcagacggaatagatggagaaaaaggaccccctgggccctctggtcca
cctggacaaaagggagaacctggagagccaggtcccgatggaccactaggagagaacggt
attgatggtctgattggagcaaagggtgatcgaggtcctattgggaatcccggtccaaag
ggtcaacctggaccaagtggtgaaccaggacctccgggactcggccttccaggactgcct
ggcacaccagggcccattggtctgccaggtgaaattggaccactgggaccaaagggtgta
ttgggctcacctggacctccaggtctccccggacctcctggcaagcccggtcctccgggg
aagtttattggcctagaagaaggaagtgcagacttccagtgtcctctgaactgtccagca
gggcctaaaggcccccaaggactccaaggagtcaagggacacaaagggcgttctggtgtc
ctgggagaccctggcagcataggaaaaatgggccccaaaggagaagttggcgtctccggg
gaacaaggtatcccaggacctccgggtcccatggggttgaggggctatcccggaatgatg
ggacctaaaggggaagcaggacctcgtggttacaaagggatccgtggacctgtaggaata
tctgggcctcctggtgaagaggggcctcagggaacacttggagaatcaggagacagggga
gacaggggcagcagaggtatccagggcccacagggagcggttggcaaaaagggagagaat
ggtctaccaggtattgatggaaaagatggcacacctggttttcctggactaaagggtgct
cctggccaagccgggatgcctggtcctcccggctctcaaggagcggcgggattgcctggc
agccctggtgccaagggagggcctggagatacgggtgaacctggacctagaggcccagtt
gggatgtcaggtgcgcccggaccattgggtgaacctgggcttcctggtgaggctgggatg
gaaggagttcctggaccaaagggagacagaggacagcgtggagaagcagggcctcaggga
atcgtcggcaagtcgggaggcaaaggagaaagaggaccaattggcgttccaggggcccag
ggtcttagcggaaccaagggagataagggcttccaaggcaaagtcgggtcaaagggagac
attggagaccctggtgtggagggactggctggcgaaaaaggtgaaaagggtttgtctggt
gaaccggggcccaaaggacagcaaggaataaggggtgattccggacacaatggtcccact
ggagaccctgggaaacctggagacccaggaccaccaggattgcctggtccaagggggctc
aacggagagcgtggagttcctggcatgcctggcattcatggtccatcaggccgtgacgca
tcggaccaacatatcattgaagtggttctgaagatgttgcaggagaggcttgcagcagtg
gcggtgagcgctaagagggatgtccttggtggggccggtgtgatgggtccgcctgggcct
cctggacctcctgggccacctggctcacagggacaacatggtttacccggtcctcgtggc
attcctggttttactggaggaccagggcagattggaaacacaggacttaaaggaaagaga
gggccaaaaggagagagaggagattccggtaaaccccatccaggaccacctggacttcca
gggatacagggtgctcctggtgtagatggtgtggcccgagacggtaggcctggagagaga
ggacctcaggggtcaccaggagaggccggttatcccgggaaggcgggtcctgcaggactc
ccggggtattgtgaggctgccatgtgcttggctgcatcagcgtacacttccccgaggcta
caggaggcgggaacaattaaaggacccaatttttag

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