Takifugu rubripes (torafugu): 101062027
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Entry
101062027 CDS
T02386
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04510
Focal adhesion
tru04512
ECM-receptor interaction
tru04518
Integrin signaling
tru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101062027 (col9a2)
04518 Integrin signaling
101062027 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101062027 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101062027 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tru00535
]
101062027 (col9a2)
Proteoglycans [BR:
tru00535
]
Extracellular matrix (ECM) proteoglycans
Others
101062027 (col9a2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101062027
NCBI-ProteinID:
XP_003969086
UniProt:
H2UPW9
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Position
12:complement(4587905..4601111)
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AA seq
691 aa
AA seq
DB search
MAALSALLKTWVILQALCLALAQVRGPPGPQGLPGPPGPSGIPGSDGIDGEKGPPGPSGP
PGQKGEPGEPGPDGPLGENGIDGLIGAKGDRGPIGNPGPKGQPGPSGEPGPPGLGLPGLP
GTPGPIGLPGEIGPLGPKGVLGSPGPPGLPGPPGKPGPPGKFIGLEEGSADFQCPLNCPA
GPKGPQGLQGVKGHKGRSGVLGDPGSIGKMGPKGEVGVSGEQGIPGPPGPMGLRGYPGMM
GPKGEAGPRGYKGIRGPVGISGPPGEEGPQGTLGESGDRGDRGSRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGFPGLKGAPGQAGMPGPPGSQGAAGLPGSPGAKGGPGDTGEPGPRGPV
GMSGAPGPLGEPGLPGEAGMEGVPGPKGDRGQRGEAGPQGIVGKSGGKGERGPIGVPGAQ
GLSGTKGDKGFQGKVGSKGDIGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDSGHNGPT
GDPGKPGDPGPPGLPGPRGLNGERGVPGMPGIHGPSGRDASDQHIIEVVLKMLQERLAAV
AVSAKRDVLGGAGVMGPPGPPGPPGPPGSQGQHGLPGPRGIPGFTGGPGQIGNTGLKGKR
GPKGERGDSGKPHPGPPGLPGIQGAPGVDGVARDGRPGERGPQGSPGEAGYPGKAGPAGL
PGYCEAAMCLAASAYTSPRLQEAGTIKGPNF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctctgccttgctgaagacctgggtaatcctgcaggccctgtgtctggct
ctggcacaagtgaggggtccacctggaccacagggtctgcccggcccaccaggcccttct
ggcatccctgggtcagacggaatagatggagaaaaaggaccccctgggccctctggtcca
cctggacaaaagggagaacctggagagccaggtcccgatggaccactaggagagaacggt
attgatggtctgattggagcaaagggtgatcgaggtcctattgggaatcccggtccaaag
ggtcaacctggaccaagtggtgaaccaggacctccgggactcggccttccaggactgcct
ggcacaccagggcccattggtctgccaggtgaaattggaccactgggaccaaagggtgta
ttgggctcacctggacctccaggtctccccggacctcctggcaagcccggtcctccgggg
aagtttattggcctagaagaaggaagtgcagacttccagtgtcctctgaactgtccagca
gggcctaaaggcccccaaggactccaaggagtcaagggacacaaagggcgttctggtgtc
ctgggagaccctggcagcataggaaaaatgggccccaaaggagaagttggcgtctccggg
gaacaaggtatcccaggacctccgggtcccatggggttgaggggctatcccggaatgatg
ggacctaaaggggaagcaggacctcgtggttacaaagggatccgtggacctgtaggaata
tctgggcctcctggtgaagaggggcctcagggaacacttggagaatcaggagacagggga
gacaggggcagcagaggtatccagggcccacagggagcggttggcaaaaagggagagaat
ggtctaccaggtattgatggaaaagatggcacacctggttttcctggactaaagggtgct
cctggccaagccgggatgcctggtcctcccggctctcaaggagcggcgggattgcctggc
agccctggtgccaagggagggcctggagatacgggtgaacctggacctagaggcccagtt
gggatgtcaggtgcgcccggaccattgggtgaacctgggcttcctggtgaggctgggatg
gaaggagttcctggaccaaagggagacagaggacagcgtggagaagcagggcctcaggga
atcgtcggcaagtcgggaggcaaaggagaaagaggaccaattggcgttccaggggcccag
ggtcttagcggaaccaagggagataagggcttccaaggcaaagtcgggtcaaagggagac
attggagaccctggtgtggagggactggctggcgaaaaaggtgaaaagggtttgtctggt
gaaccggggcccaaaggacagcaaggaataaggggtgattccggacacaatggtcccact
ggagaccctgggaaacctggagacccaggaccaccaggattgcctggtccaagggggctc
aacggagagcgtggagttcctggcatgcctggcattcatggtccatcaggccgtgacgca
tcggaccaacatatcattgaagtggttctgaagatgttgcaggagaggcttgcagcagtg
gcggtgagcgctaagagggatgtccttggtggggccggtgtgatgggtccgcctgggcct
cctggacctcctgggccacctggctcacagggacaacatggtttacccggtcctcgtggc
attcctggttttactggaggaccagggcagattggaaacacaggacttaaaggaaagaga
gggccaaaaggagagagaggagattccggtaaaccccatccaggaccacctggacttcca
gggatacagggtgctcctggtgtagatggtgtggcccgagacggtaggcctggagagaga
ggacctcaggggtcaccaggagaggccggttatcccgggaaggcgggtcctgcaggactc
ccggggtattgtgaggctgccatgtgcttggctgcatcagcgtacacttccccgaggcta
caggaggcgggaacaattaaaggacccaatttttag
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