Takifugu rubripes (torafugu): 101062289
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Entry
101062289 CDS
T02386
Symbol
tia1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101062289 (tia1)
03041 Spliceosome [BR:
tru03041
]
101062289 (tia1)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101062289 (tia1)
Spliceosome [BR:
tru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101062289 (tia1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_ACIN1
RRM_Nup35
Calcipressin
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
101062289
NCBI-ProteinID:
XP_003978167
UniProt:
A0A674PGH4
LinkDB
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Position
6:complement(7949448..7955298)
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AA seq
385 aa
AA seq
DB search
MDDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETTDMVSPMQQVQMPQQNTMSFAAQH
YSQWGQWYGNTQQIGQYVPNGWQVPSYGVYGQTWDQQGYNQLHAGAGWTGMSAVSNGGMV
EPGQGVNGTMLTNQTGMSTAGYPTH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaacagcccaaaaccctgtatgtggggaatctgtccagggatgtgacagag
gccctcatcttggagttgtttggccagattggaccctgcaagagctgtaaaatgatagta
gatacagcaggccatgatccgtactgctttgtggaattctatgaacatagacacgccact
gccacaatcgcagccatgaatggtcggaaaattctgggtaaggaagtcaaggtcaactgg
gccacgacgccaaccagccaaaagaaagacacaagcagtcacttccacgtcttcgttgga
gacctaagtcctgaaatcaccacagatgacatcaaagcggcttttgggccctttgggaaa
atatcggactgtcgggtggtcaaagacatggccacaggtaaatctaaaggatacggcttt
gtctccttcttcaacaaatgggatgcagagaacgccatacagcagatgggtgggcagtgg
ctgggaggcaggcagatcagaaccaactgggccacaaggaagcccgcccccaagactaca
aatgaaactactaacaccaagcaactatcttttgacgaagtggtcaaccagtccagcccc
agcaactgcactgtttactgcgggggggtgacaacaggtctcacagagcaaattatgaga
cagaccttctcaccctttggccatataatggaaatccgcgtgttcccagacaaaggctac
tcatttgtgaggttcaactctcacgaggcagcagctcacgccatcgtgtccgtcaatggc
acgaccatcgagggctacgtcgtcaagtgttactggggcaaggagacgacggatatggtc
agccccatgcagcaggtgcagatgccgcagcagaacaccatgagctttgcagcgcagcac
tacagccagtgggggcagtggtacggcaacacgcagcagatcggacagtacgtccccaac
ggatggcaggtacccagctatggcgtctacgggcagacctgggatcaacagggttacaat
cagttacatgccggggctggatggacaggcatgagcgccgtgagcaacggaggcatggtg
gagccgggtcagggggtcaacgggacgatgctaaccaaccagactggcatgagcaccgcc
ggctaccccactcactga
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