Takifugu rubripes (torafugu): 101062333
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Entry
101062333 CDS
T02386
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
101062333
Spliceosome [BR:
tru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101062333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_2
TPR_12
TPR_MalT
TPR_11
GAT
COX5A
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
101062333
NCBI-ProteinID:
XP_011608832
Ensembl:
ENSTRUG00000014484
LinkDB
All DBs
Position
14:4034538..4039498
Genome browser
AA seq
725 aa
AA seq
DB search
MAAEGCEEMSGNGELEDSSAMEMSEVAEAPLTGTEEMSEKNGTATEVPEAPVCAEPDSVS
THLAAEDVDKGLPADFERLWTAANDNPQDFTSWTDLLQYCEQEGNITASRRALESFLVRY
PLCYGYWKKFADIERRAGYNDRAEQVCVQGLQVIPLSVDLWIHYINLLLGTLDMNLPESP
PRIRSVFEDAVRAAGLDFHSDRLWDLYVEWEKEQGNMRNATAVLDRVLKVPTQLYNTHYD
KFKEHLNNNEPKEILSPEEYEELRASCRQSQKADCAEQTQEEKQETPPGEEKPTTPEGLD
TEELKQKIREKVSLQREKVYQENEDEVRKRWHYEDAIKRPYFHVKPLDHLQLQAWHSYLD
WEIAELNKDTNQSSQEAQQSSTEESEPTAQPQEPLEEVTGHRDDHRIRVLFERCLIACAL
YEEFWTRYTRYLESHNVEEARAVFKRACEIHLTRRPNICMQWATFEERHGNLSEARRVLE
TIEETVPGLAVVRLRRVALERRAGQLERSEALLQEAVAGSKEKPTLHAFYSIKLARLLLK
LGRNPSKARTVLQEALEISPNNDKLHINLLEVEVSGDTWASDEVVQECVTRALAAPLTPQ
TKILLSQRGLQFAEDYSNSIQSVLSLYEGHQKLLQDLGGTKRGAENGEEDAEKLGKGDED
AAVAVSAEASQTMPQVPITTPPPPVTDMSGQAAYGGYSSWYQQPQYGNYGYHNTWNYNQG
YYPTS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaggttgtgaggagatgagcggcaatggagagcttgaagactcttcggcc
atggagatgtctgaagttgctgaagcccctcttactggaacggaagaaatgtcagagaaa
aatggaactgccacggaggttcctgaggcccctgtctgtgcggagcctgattctgtctcc
acacacctagctgcagaggacgtggacaaaggactacctgctgactttgaacgtttgtgg
acggctgccaatgacaatcctcaagacttcacaagctggactgacctgctgcaatactgt
gagcaagaggggaacatcactgcatcacgcagagcactagagagcttcctggtgcgctac
ccactttgctacggctactggaagaaatttgctgatattgagcgccgagctgggtacaac
gatagagcagagcaggtgtgtgttcagggtctgcaggtaatcccgctcagtgtcgatctg
tggatccactatatcaatctgctgctgggaacactcgatatgaacctgcctgagtcgccc
ccacggattcgcagtgtgtttgaggatgcagtccgggcagcaggtctggacttccactca
gaccggctttgggatctttatgttgagtgggaaaaagagcagggaaacatgaggaatgcc
actgctgtcctggacagggtcctcaaagttcccactcagctctacaacactcactatgac
aagtttaaagaacacctgaacaacaatgagcctaaagagatcctttctccagaggagtat
gaggagctgagggcatcatgccggcaaagccagaaggccgactgtgctgaacaaacacag
gaggagaagcaagagacgccacccggggaggaaaagcccaccacccctgagggcctggac
acggaggaattgaagcagaagatcagggaaaaagtgtcgcttcagagggaaaaggtgtac
caagaaaatgaggacgaggtccgcaagagatggcactatgaagatgctatcaaacgtcca
tacttccatgttaagccactggaccacctccagctgcaggcctggcactcctatctggac
tgggagattgccgagctgaacaaagacactaatcagtccagtcaagaggcacaacagtca
tccacagaggagtcggagcctacagcccagcctcaggagccattagaggaggtcaccggt
caccgtgacgaccacaggatccgcgtactttttgagcgctgcctgattgcctgtgccctg
tatgaggagttctggaccaggtacactcggtacctggagtcacacaatgtcgaggaggcg
cgagcggtctttaaacgagcctgtgagatccacctgacgcgcagacccaacatctgcatg
cagtgggccaccttcgaggagaggcacggtaacttgagcgaggctcgacgggtgttggag
acaatagaggaaaccgtgccggggttggctgtagtccgtctgcgcagggtggctttggag
agaagagccggccagctggagcgatcggaggctttgctgcaggaggctgtggctggatcc
aaagagaagcccaccttacacgccttttactctataaagctggctcgtttgctgctgaaa
ctgggcaggaaccccagcaaagcccgcacggtcctacaggaggctttagagatcagtccg
aataatgataaactccatattaacttgttggaggtagaagtgtcaggagacacctgggcc
tcagatgaggtggtgcaggagtgtgttacgcgagctctggctgctcccctcaccccacaa
actaagatccttctgtcacagagaggcctccaatttgctgaagattacagcaactcaatc
cagagtgttctctctttgtatgaaggccaccagaaactgctgcaggatctgggtggaaca
aaaagaggagcagagaacggggaggaagacgcagagaaactcgggaaaggtgacgaagat
gcggctgttgctgtgtctgcagaagcctcgcagaccatgcctcaggtccccatcacaaca
ccccctcccccggtgactgacatgagcggacaggctgcgtacgggggatacagcagctgg
taccagcagccccagtatggcaactatggctaccataacacctggaactacaaccagggt
tattatcctaccagctag
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