Takifugu rubripes (torafugu): 101062698
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Entry
101062698 CDS
T02386
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04137
Mitophagy - animal
tru04140
Autophagy - animal
tru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101062698 (hif1al)
04137 Mitophagy - animal
101062698 (hif1al)
04148 Efferocytosis
101062698 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101062698 (hif1al)
Transcription factors [BR:
tru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101062698 (hif1al)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
IMEF_Flp
Sld7_C
Motif
Other DBs
NCBI-GeneID:
101062698
NCBI-ProteinID:
XP_029699134
LinkDB
All DBs
Position
11:complement(14443380..14451832)
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AA seq
676 aa
AA seq
DB search
MEPPQDQCDDVLLSQAYGKNQQNELIRSSSEQRKLRSRDAARYRRSQETEVFYELAHTLP
LPRRVSTHLDKSAIMRVALSVLRMRQLVQAVPAASESQKKEPEEDPMDIFYPQTLGGFIM
VLTEEGDMIYLTENVNKYIGIVQLELLGQSVYDFIHPCDQEELTDLLTPRPGLNKKLMKD
LPNDLNFFLRMKSTLTNRGRTVNIKSAEWKVLHCTGHMCPFGGEPSSPAAARVMVLLCEP
IPHPSSVEFLLDTYTFLTRHSMDLRFTHCEGRVTELVGYKPDDLIGRSAFEFHHALDSDH
ISKSLRTLLSKGQVSTRHYRFLANNGGFVWAETQATVLYSGKTSQPEAIVCLNFILSSVE
QPEFVFSIEQVHSDPPEANVPALAPADSDTPLKSETALDTPCKVENVGSSSSNAADLFFK
LKEKPQELLQLAPEAGDVVPLTDFSKLSFFSPSSPDTMPENPQDLCSPQLLQLLTPIFSP
MTPPSSSTSDAELSASEEVMDTSKVEKFFTIRPENSQEKGEKLKDSEEMDLAMLAPYISM
DDDFQLTFLSSLSEEEDKRSAPLRTLSAALAANRKRSHNPDEDEASDLLIEDKRQKKEAS
CIEEELLNYTYNLGCLDEGDQPNSTLSAEGGGSSRLLTDKDPLLGGMQGLSDTAAWMKDI
FIVRPPDLSPPASPLT
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcctcaggatcaatgtgatgacgtcctgctttcacaagcatatggaaaaaac
caacaaaatgagctgatcaggagcagttcggagcagaggaaactgcgctcccgcgatgca
gccagatacaggcggagtcaggagacggaggtgttttatgagctcgcccacacgctgccg
ctccctcgccgggtgtccacccatctggacaaatcggccatcatgagagtcgctctcagc
gtcctgcggatgcgccagctcgtccaagctgttcctgcagccagtgagagtcagaaaaag
gagcctgaagaggatccgatggacattttctaccctcagaccctgggtgggttcattatg
gtgttgactgaggagggagacatgatctacctgacggagaacgtcaacaagtacatcggc
atcgtgcagctggagctgctgggccagagtgtttatgacttcatccatccctgcgatcag
gaggagctcacagacctgctgactccacgtccaggtttgaataagaaactgatgaaggac
ctgccaaatgacctcaacttcttcctgcgaatgaagagcactctgaccaacagggggcgc
actgtcaacatcaaatctgctgaatggaaggttctccactgcacaggtcacatgtgtcca
tttggtggtgaaccgagctccccagctgctgccagagttatggtcctgctctgcgagccc
atccctcacccctccagcgtggagtttctgctcgacacctacaccttccttacccgccac
agcatggacctgcgcttcacacactgcgagggcagggtgacggagttggtgggatataaa
ccggatgacctgatcggccgctcggcttttgagttccatcatgcgctcgactccgatcac
atcagcaagagccttcgcacactgctgtccaagggtcaggtgagcacccgccactaccgt
ttcctggccaacaatggcggcttcgtctgggcagagacgcaggcgaccgtcctctatagc
ggcaagacctcccagcctgaagccatcgtctgcctcaacttcatcctcagttccgtggag
caaccagagtttgttttctccatcgagcaggttcactctgatccgcctgaagccaacgtt
ccagcactcgcaccagcagatagtgacactcccctgaaatctgaaacggctctcgacacc
ccctgcaaggttgagaatgtgggttcaagttccagcaacgctgccgatctattctttaaa
ctgaaggagaagcctcaggagctgctccagctggctccagaggctggagatgttgtacca
ctgacagatttttccaagctgtccttcttcagtccctccagtccagacaccatgccagag
aaccctcaggatctctgctctccacaactgctacagctcctcacgccaatcttcagcccc
atgacaccaccttcatcatccacatctgatgctgagctgagcgcctcagaggaggtgatg
gacaccagcaaagtggagaagtttttcacaattcggccagagaacagccaggagaaagga
gagaaactcaaggactctgaggagatggatttggcgatgttggctccgtacatatctatg
gatgatgacttccagctgacctttctcagcagtttgtcagaggaagaagacaaacgttct
gcccctctgcgcacgctctcagcggcactggcagcgaacaggaagaggtcccataaccca
gatgaagatgaggcgtccgatctgctgattgaggacaagagacagaaaaaagaagcttcc
tgcatcgaagaggagcttcttaactacacatataacctgggctgcctggatgagggcgac
caaccaaattcaaccctgagcgctgagggaggagggagcagtcggctgctgacggacaag
gacccgctgttgggagggatgcagggcctctccgacactgccgcctggatgaaggacatt
ttcatagttcgtccacctgatctgtcgccgcccgcctcccctctgacatga
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