Takifugu rubripes (torafugu): 101062698
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Entry
101062698 CDS
T02386
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X3
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04137
Mitophagy - animal
tru04140
Autophagy - animal
tru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101062698
04137 Mitophagy - animal
101062698
04148 Efferocytosis
101062698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101062698
Transcription factors [BR:
tru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101062698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
IMEF_Flp
Sld7_C
Motif
Other DBs
NCBI-GeneID:
101062698
NCBI-ProteinID:
XP_011607021
Ensembl:
ENSTRUG00000008563
LinkDB
All DBs
Position
11:complement(14443380..14451832)
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AA seq
661 aa
AA seq
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MEEKEESISIKRSSSEQRKLRSRDAARYRRSQETEVFYELAHTLPLPRRVSTHLDKSAIM
RVALSVLRMRQLVQAVPAASESQKKEPEEDPMDIFYPQTLGGFIMVLTEEGDMIYLTENV
NKYIGIVQLELLGQSVYDFIHPCDQEELTDLLTPRPGLNKKLMKDLPNDLNFFLRMKSTL
TNRGRTVNIKSAEWKVLHCTGHMCPFGGEPSSPAAARVMVLLCEPIPHPSSVEFLLDTYT
FLTRHSMDLRFTHCEGRVTELVGYKPDDLIGRSAFEFHHALDSDHISKSLRTLLSKGQVS
TRHYRFLANNGGFVWAETQATVLYSGKTSQPEAIVCLNFILSSVEQPEFVFSIEQVHSDP
PEANVPALAPADSDTPLKSETALDTPCKVENVGSSSSNAADLFFKLKEKPQELLQLAPEA
GDVVPLTDFSKLSFFSPSSPDTMPENPQDLCSPQLLQLLTPIFSPMTPPSSSTSDAELSA
SEEVMDTSKVEKFFTIRPENSQEKGEKLKDSEEMDLAMLAPYISMDDDFQLTFLSSLSEE
EDKRSAPLRTLSAALAANRKRSHNPDEDEASDLLIEDKRQKKEASCIEEELLNYTYNLGC
LDEGDQPNSTLSAEGGGSSRLLTDKDPLLGGMQGLSDTAAWMKDIFIVRPPDLSPPASPL
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaagaggaaagcatcagcatcaaacggagcagttcggagcagaggaaactg
cgctcccgcgatgcagccagatacaggcggagtcaggagacggaggtgttttatgagctc
gcccacacgctgccgctccctcgccgggtgtccacccatctggacaaatcggccatcatg
agagtcgctctcagcgtcctgcggatgcgccagctcgtccaagctgttcctgcagccagt
gagagtcagaaaaaggagcctgaagaggatccgatggacattttctaccctcagaccctg
ggtgggttcattatggtgttgactgaggagggagacatgatctacctgacggagaacgtc
aacaagtacatcggcatcgtgcagctggagctgctgggccagagtgtttatgacttcatc
catccctgcgatcaggaggagctcacagacctgctgactccacgtccaggtttgaataag
aaactgatgaaggacctgccaaatgacctcaacttcttcctgcgaatgaagagcactctg
accaacagggggcgcactgtcaacatcaaatctgctgaatggaaggttctccactgcaca
ggtcacatgtgtccatttggtggtgaaccgagctccccagctgctgccagagttatggtc
ctgctctgcgagcccatccctcacccctccagcgtggagtttctgctcgacacctacacc
ttccttacccgccacagcatggacctgcgcttcacacactgcgagggcagggtgacggag
ttggtgggatataaaccggatgacctgatcggccgctcggcttttgagttccatcatgcg
ctcgactccgatcacatcagcaagagccttcgcacactgctgtccaagggtcaggtgagc
acccgccactaccgtttcctggccaacaatggcggcttcgtctgggcagagacgcaggcg
accgtcctctatagcggcaagacctcccagcctgaagccatcgtctgcctcaacttcatc
ctcagttccgtggagcaaccagagtttgttttctccatcgagcaggttcactctgatccg
cctgaagccaacgttccagcactcgcaccagcagatagtgacactcccctgaaatctgaa
acggctctcgacaccccctgcaaggttgagaatgtgggttcaagttccagcaacgctgcc
gatctattctttaaactgaaggagaagcctcaggagctgctccagctggctccagaggct
ggagatgttgtaccactgacagatttttccaagctgtccttcttcagtccctccagtcca
gacaccatgccagagaaccctcaggatctctgctctccacaactgctacagctcctcacg
ccaatcttcagccccatgacaccaccttcatcatccacatctgatgctgagctgagcgcc
tcagaggaggtgatggacaccagcaaagtggagaagtttttcacaattcggccagagaac
agccaggagaaaggagagaaactcaaggactctgaggagatggatttggcgatgttggct
ccgtacatatctatggatgatgacttccagctgacctttctcagcagtttgtcagaggaa
gaagacaaacgttctgcccctctgcgcacgctctcagcggcactggcagcgaacaggaag
aggtcccataacccagatgaagatgaggcgtccgatctgctgattgaggacaagagacag
aaaaaagaagcttcctgcatcgaagaggagcttcttaactacacatataacctgggctgc
ctggatgagggcgaccaaccaaattcaaccctgagcgctgagggaggagggagcagtcgg
ctgctgacggacaaggacccgctgttgggagggatgcagggcctctccgacactgccgcc
tggatgaaggacattttcatagttcgtccacctgatctgtcgccgcccgcctcccctctg
acatga
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