Takifugu rubripes (torafugu): 101062976
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Entry
101062976 CDS
T02386
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101062976
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101062976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1
UBA_N4BP1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
101062976
NCBI-ProteinID:
XP_003966476
Ensembl:
ENSTRUG00000022519
UniProt:
A0A3B5KFY1
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All DBs
Position
8:complement(2244328..2257988)
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AA seq
950 aa
AA seq
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MGQKDHVESAAGHILHLGLDLEYLHVARADRHTGGSDEPPAMEEQGETSGSSDKAASPLP
DAVEENIRPDADSELAPSSTIILHEDGHEGSTPGKNTHQPLCRTQCVDLGTEGPPELSAE
LKHDNPLPPVTPREEPPEPPEPPPPEPVGNDGRKGYQAKLDFALKLGYSEETVRQVLSKL
GPETLINDILGELVKLGNKSDNEQPARTLASTSSSSSSSSSCGSSDVLDGQRSNSPCPSD
SLGDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDITVFVPAWRKEQS
RPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYR
DLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVMPEQKKQPCP
YGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVMVKSQGDAGLVKSHSVPAGSME
ARKGAPKRQSDPSIRALSYSDAEEKLLTKGRADIQKSMCGSASASCSGSVTMTMSPAIEG
VPPASLSFPQDQQSRAGTPHGLPTSNHDLYPHCESPDLNYYSVTRAYSGLSLSTRRSPDC
RFPNDTDLRLGSMGSTGSECGSESSVSCSSSCDSYSERPCPGCPSDSLLEDGVHFVNPHS
RVYPSATNQELCGLHLADYTNLQHGHSSHPGIHGYHLSIAHGQSCAHEQPPPEAPPKRPL
YPLPPHLQHQPLSARSSCPGDYHSLPQPNPHPPGSPLGRCLAPTRAGSVSDSHLYEHLSA
PHHHHRTKAPPSWDSYYRHNPLPPSRYELSAYLPDSQQTSWHGSAWAQDGYGQHHSSHAG
LHPSPTHYVNHPPPPSHSPHPPSASHQPYSRHLLVPSHTPPLSYMQQPPESPTRSRYSDA
REKVYVNLCNIFPTELVSRVMARSPHVTDPQQLAAAILAEKALGTGLLIN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggagtcagcagcaggccacatcctccacctggggcttgac
ctggagtatctccacgtagctagggctgaccggcacactggcggctctgacgagccccct
gctatggaggagcagggggagacctccggcagcagcgataaggctgcttcccccctgcca
gatgccgtggaagagaatatcaggcctgatgcagattctgaactagccccgtcttccacc
atcatcctccatgaggacggacacgaggggtccactcctggtaaaaacacacaccagcca
ctgtgtcgaacccagtgtgtggacctaggtaccgagggtccccctgaactctctgcagag
ctcaaacatgacaaccccttaccacccgtcaccccgcgcgaggagccacccgagccaccc
gagcctcctcccccagaaccagtgggtaatgatggtaggaaggggtaccaggccaaactg
gattttgctctgaagctaggctactctgaagagactgtgcgacaggtgctgtccaagctc
ggccctgaaaccctaatcaatgacatactgggagagctcgtcaaactggggaacaagtcg
gacaacgagcagccggcacggacattggcctccacttcgtcttcttcgtcctcctcttcc
tcctgtggctcttcagatgtgttggacggacagaggtcaaactcaccgtgcccttcagac
tctctgggtgaccaggacaacctgcggccaatcgtggtggacggcagcaacgtagccatg
agccatggcaataaggaagtgttttcctgccaagggatccagctggctgtagactggttc
ttagagcgtggccaccatgacatcacggtgttcgtgcctgcatggaggaaagagcagtcg
cgccctgacgccccaataacagatcaggagatcttgcgtcgcctggagaaggagaagatt
ctggtgttcaccccatctcggcgtgtccaaggccgtcgtgtggtttgctatgacgaccgc
ttcattgtgaagctggcgtacgagtccgacggcatcatcgtctccaacgataactaccga
gatctggcaaatgagaaaccagagtggaagaagttcatcgacgagcggctgctcatgtat
tcctttgtcaatgacaaattcatgcctccggatgatccacttggtcgccatggccccagc
ttagacaactttctaaggaaaagacctgtcatgcccgagcagaagaaacagccatgtcca
tatgggaagaagtgcacttacggccacaagtgtaagtactaccatcctgagagaggggca
cagcctcagcgtgccgtggcagatgagctgcgtgccagtgccaagacttgtgttatggtt
aagagccagggagacgccgggttagtgaagagtcatagcgtaccagctggcagcatggag
gcgagaaagggcgctcccaaaaggcagtcggacccgagcattcgcgccctgtcctacagc
gacgcagaggagaagctgctgaccaaaggaagggcggacatccagaaaagcatgtgtggc
agcgctagcgctagctgcagcgggagcgtgaccatgaccatgtctcctgccatagaaggt
gtccccccagccagtctcagcttcccacaggaccagcagtccagagcagggacgcctcat
gggctaccaacctccaaccatgacctttaccctcactgtgaatctccagacttgaactac
tattcagtgacccgtgcctactctggcctgagcctctcgaccagacggagccccgactgc
cgcttccccaacgatactgacctgcggttgggctcaatgggctcaacgggttcggaatgt
ggcagcgaaagcagcgtaagttgcagtagcagctgcgactcctatagcgagaggccttgt
cccggatgcccctccgattccttgttggaggatggcgtccattttgttaatccccatagc
cgggtgtatccgtctgcaaccaatcaggagctttgcggccttcaccttgcagactacacc
aatctccagcacggccactcatctcatcctgggatacatgggtaccacctcagcatagca
cacggacagagctgcgctcacgagcaacctccacccgaagcgcccccaaagcgtcctctt
tatccgctacctcctcacctccaacaccagccgctgtctgcacggtccagctgcccgggc
gactatcactcgctccctcagcccaatcctcacccgcccgggtcccctctgggacgctgt
cttgcacccacgcgagccgggagcgtgtcggactcgcatttgtacgaacacctctccgca
ccacatcaccaccaccggacgaaagctccgcccagctgggattcgtactacagacacaat
ccgttgccaccgtcccggtacgagctgtcagcctatctgccggactcccaacagacatcc
tggcacgggagcgcttgggctcaggacggctacggccagcaccattcatcccacgcaggt
ctccacccatccccaacgcattacgtcaaccatccgccgcctccgtcccactctcctcac
ccacccagtgcttcccaccagccgtattcccgccacctcctggtgccctcccacaccccg
cccctgtcttacatgcagcagcccccggaatcaccgacacgcagccgctacagcgacgcc
agggagaaggtttacgtcaacctgtgcaacatcttccccaccgagctggtgagccgagtg
atggccaggagcccccacgtcacagacccccagcagctggcagctgcaatccttgcagag
aaagccctgggaactggtttattaattaactaa
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