Takifugu rubripes (torafugu): 101063076
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Entry
101063076 CDS
T02386
Symbol
hmbox1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101063076 (hmbox1)
Transcription factors [BR:
tru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101063076 (hmbox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
DUF494
AbiJ_NTD3
HTH_37
HTH_23
HTH_31
Colicin
NOC3p
Motif
Other DBs
NCBI-GeneID:
101063076
NCBI-ProteinID:
XP_029705821
Ensembl:
ENSTRUG00000020592
LinkDB
All DBs
Position
16:complement(1660016..1671885)
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AA seq
499 aa
AA seq
DB search
MSDFSEEPRFTIEQIDLLQRLRRTGMTKQEILHALDTLDRLDREHGDKFGHRTSSSSSSL
SYGAGGANNTSASNATTSLNSTTSASAAATSSASCNGNNSSEGNAADHLAAPAASSTTSK
ISTATQTQFGSGGLSPSPGNNYDTSPPPGPPPPSAILPSPVSLVALSQNGRDSLAATPNG
KLSPPRYPVNSSAAARAFGFEAAEEDLDIDDKVEELMRRDSSMVKEEIKAFLGNRRISQA
VVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYTLEKTTPGATLNMRPLPMEEMEWR
QTPPPIATAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIANACNAVIQKP
GKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGGHSNSDDIDGND
FSEQACDLPYFDKRPLSRPFGLYRLEPTSPTQDDSAVHSEHQDPISLAVEMAAVNHSILA
LSRTGGVPNDIKTESLEDE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcagcgaggagccgcgcttcaccatcgagcagatagatctgctgcagcgg
ctgcgtcgcaccggtatgaccaagcaggagatcctgcacgcgcttgacactctggaccgg
ctggaccgggagcacggtgacaagtttggccatcgaacctcttcttcctcgtcctcattg
tcctacggcgccggtggggcaaacaacacctctgcctccaatgctactacatcactcaac
agcaccacctctgcctcggcggccgccacctcctccgcgtcctgcaacggcaacaacagc
tccgagggcaacgccgccgatcacttggcggcacccgccgcgtcttccacgacttccaaa
atctccaccgccacacagacgcagtttggcagcggaggactttcaccatcccccggcaac
aactacgacacgtccccgcctccggggcctccgccgccatcagccatcctgccctcgccg
gtttctctcgtggcgctgtcccagaacggccgggacagcctggcggccacgccgaacggg
aagttgtccccgccaaggtacccagtgaacagttcggccgcggcgcgagcgtttgggttt
gaagccgcagaagaagacctggacatcgacgacaaggtggaggagctgatgaggagggac
agcagtatggtgaaagaggaaatcaaagccttcctggggaacaggaggatctctcaggca
gtggtggcacaggtcactgggatcagccagagcaggatctcccactggctgctgcagcat
ggctccgacctgagcgagcagaagaagagggccttctaccgctggtacacgctggagaaa
accaccccaggtgccaccctgaatatgcggccgttgcccatggaggagatggagtggcgg
cagaccccgcccccgatcgccacggcccccggaaccttccggctgcgtcgaggaagccgc
ttcacttggagaaaagagtgtttggccgtgatggagagctacttcaacgacaaccagtac
ccagacgaggccaaacgggaggaaatagcaaacgcctgcaacgctgtgattcagaaacca
gggaagaagctgtccgacctggagcgggtcacctcgctcaaggtctataactggttcgcc
aaccgccgcaaagagatcaagagacgggccaacattgaagccacaatcctggagagtcat
gggatagacgttcagagcccaggaggacactccaacagtgacgacattgacggaaacgac
ttctcagagcaggcatgcgatctgccctattttgacaagagacctctcagccgacctttt
ggcctttaccgtctggagcccacctccccgacacaggatgacagcgcggtgcacagcgag
caccaggaccccatctctctggctgtggagatggccgctgtcaaccactccatcctggcc
ctgtccagaaccgggggggtccccaacgacatcaagaccgaatccctggaggacgaatga
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