Takifugu rubripes (torafugu): 101063273
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Entry
101063273 CDS
T02386
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru00310
Lysine degradation
tru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101063273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101063273
03036 Chromosome and associated proteins [BR:
tru03036
]
101063273
Enzymes [BR:
tru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
101063273
Transcription factors [BR:
tru03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101063273
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101063273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2HE
zf-C2H2_6
zf-C2H2_8
YjdM_Zn_Ribbon
Motif
Other DBs
NCBI-GeneID:
101063273
NCBI-ProteinID:
XP_003963302
Ensembl:
ENSTRUG00000023355
LinkDB
All DBs
Position
3:complement(7627258..7633953)
Genome browser
AA seq
1323 aa
AA seq
DB search
MEEEEEDIPQEETDVSSDVNIAHKSDLHQHPGQDIGKDGISFSCQHCERHFCSIQALERH
MDIHMTHAYETNNKIISLVSNLDQLQHEKTELDSEGLDMLPHSSLLIRSNTPTSSTGDSI
EQPDKRRVSDGQHACSYCEKVFSTHTSRQRHEHRVHEQNSQVAAVKPQLHPEKHLEKVTC
DSSLSNQDKTEPGDRTEPAAGQDNEDSAERYMLDVSSNASENLSFYIDGKIVSTSTVASC
ESTEGHSVSPTLLRLDSLILDPSKELPGQTLTKRRTATPPLLPQIKTELESEVVVSSSSS
SIVTSLIETILPQRAESTVAHKERTVFLSPKLKQLLEKEDGLKPTLALIADGQNSCTPVS
LSVLPAGTGRFKRRTGSPLSSPTNPTTNKEAEVADCELVSADQVEVQCSSSPVHQPAGEP
DDTSLSEAQRNDVQADSWPLVTGGNPCNQQPLDLSNTIKKTGDDAVLDLSLQKKILGEGE
GTSNLASLAALNEEASKVCTSQSTLMDIREDNPIVTDFTIVTAPDLIAPVDPVVEGLVYG
LTLPSNSLTPSPASLTPVALQPASPCTIAFAAPASHAILPTAPSLLTVLAPPPLTNPSGH
SVQVLAPNISPEGLVICTENPLNAAECNLTTAFAANSSLVALSQPLDPALNLPSHVFLTD
QITLNPPLVESTPVSEVTLTPAVTLNDPLINSYNISNTVLIECTIALEPPRSVAPAVSTL
QEHASDPAAPAEVGLIKRNNMASAPGLQAADPADPAEPETPVSDNAAAAESEPVVDPQPP
TLIKEEVADCDIPSPKTTSFPSPATAEEDASPGSTGADAQVQTFTKNFICNVCEKLYHSM
KELSDHVGAHADDWPYKCEFCVLLFGKPSDLLDHRSSLHGVGKTYACSVCTKEFVYLCNL
KRHQEELHPGQQCTYAEEEKGKLRPQNYNNSARVGAEPPAPDARGETKKAAKTEEGGEAV
AAEEFFTTVKIKASDGDELKGSDVRLGINQHYPSFKPPPFPYHNRSPASSVTSATNFTTH
NIPQTFSTAIRCTKCGKSFDNMPELHKHILACATASDKKRYTPKKNPIPLRHFAKTQHGV
LSATNSAHGLNDSNRSDHPTRSKPTQDSAVKLRLKVLGKRKKKLVQRVMPQRNKSDHNSN
RTAPAQVHDKQEVFVCPHCSREFTMRRSRTKHMAVCPRKLSEVKKRKEGGISVTKENDEK
LRIVGEDKLQASPQHKTRLQTAGLGKRAAILPVQTVFTSKRSKIIIKESMQPKAEAPSLN
ELPMVRTFNPAMRQYSRVQPNVKGIPIKITIVKPQQSAPPEGELSSTQSQEKAASRSEQS
PSP
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggaggaggacatccctcaggaggagaccgatgtttcctcagacgtgaat
atagcacacaaatcggatcttcatcaacatcccggtcaggatattgggaaggacgggatc
tctttctcatgtcagcactgtgaaagacatttctgcagcatacaagccttggaaagacat
atggacattcacatgacacatgcctatgagaccaataacaaaatcatctctttggtttca
aatctagatcagctgcaacatgaaaagacagaactggattctgaaggcttggatatgctg
cctcattcttcactcctcattcgctccaacactccaacctcgtcgactggagactccatc
gaacagccggacaaacgcagggtatcagacggtcagcatgcctgcagctactgtgagaaa
gtgttcagcacacataccagcaggcagcggcacgagcacagggtccacgagcagaactcg
caagtggctgcggtgaaaccgcagctgcacccggaaaagcaccttgagaaggtaacctgt
gattcctcgctctcgaatcaagacaaaacggagcctggcgataggacagaacctgctgcg
ggtcaggacaacgaagattccgccgagcgatatatgctggatgtgtcgagcaacgcctcg
gagaacctcagcttttatatcgatggaaaaatagtgtcaacaagtacggtcgctagctgt
gaatccaccgagggtcattctgtgtcccccactttattgagactggattctctgattcta
gatcccagcaaagagttacctggtcaaaccctgaccaagagaagaacagcgacaccacca
cttttaccgcaaatcaaaacggaactggagtctgaggtggttgtctcctcatcgtcctca
tcgattgtgacttctttaatagaaacgattctcccgcagagagcagaatctaccgttgcc
cacaaggagcggacggtgttcctgtcccccaagctgaagcagctcctggagaaagaggat
ggtctcaaacctacactcgcactcatcgcagatgggcagaattcctgcactcccgtttct
ctctctgtccttcctgctggaacagggaggtttaaaagaaggaccggatccccgctgagc
tccccaacaaacccgacgacaaacaaggaagcggaggtggcggactgcgagctcgtaagt
gcagaccaggtggaagtccagtgcagttcgtcacctgtgcaccagccggccggtgaaccc
gatgacacgtctctgtccgaggcacaaaggaatgacgttcaggccgacagctggcccctc
gtgacgggcggtaatccctgcaaccaacaacccctggatctctctaacaccatcaagaag
acgggagacgatgctgtgctggatttgagtctgcaaaaaaagatcctgggtgaaggtgag
ggtacgtcaaatttagcgtcactggcggcgttgaatgaagaggcctccaaggtttgcacc
agtcagagcaccttaatggatatcagagaggacaatcccatagtaacagacttcaccata
gttacagccccggatctgatcgccccggtggatcctgttgttgaaggacttgtttacgga
ctcaccctgccctccaactccctgactccgtcacccgcctctctcacccctgttgcgctg
cagccagcttcgccgtgcacgatcgcctttgcggcgccagcttcccacgccatactcccc
accgctccttcattgctcacagttttggctcccccacccctgaccaacccctcaggccac
tcggtccaagtcctggctcccaacatatcgcccgagggtttggtaatctgcacggagaac
cccttaaatgctgccgaatgtaatttaaccactgcgttcgcagctaattccagtctcgtg
gccctctcccagcctctggacccggcactaaatctacccagccacgtcttcctcactgat
cagataaccctcaatccacctttggttgaatccacccctgtgtctgaggtgacgctgacg
cccgcggtgaccttaaacgacccgctcattaactcttacaacattagcaacacggtgttg
atcgaatgcacaatagccctggagcccccgcggagcgtggcccctgccgtcagcacgctg
caggagcacgcgtcagatcctgcagcccctgcagaggtggggttaatcaaacggaacaac
atggcatcagcgccgggtcttcaggccgcggaccccgctgaccctgcagaaccagagact
ccagtttctgataatgctgctgcagctgagtcggagcccgtcgttgatccgcaaccacct
acgctcataaaagaggaagttgctgattgtgacattccttcacccaaaacaaccagcttc
ccttcacccgcgacagcagaagaagacgcctccccaggcagcaccggggctgatgcacag
gtgcagaccttcaccaagaatttcatctgcaacgtgtgcgagaaactctatcattcaatg
aaggagctcagcgaccacgtcggcgcccacgcggacgactggccctacaagtgcgagttc
tgcgtgctgctcttcgggaaaccgtctgacctgctggaccaccgctcgagcctccacggc
gtcggaaagacttacgcgtgcagcgtgtgcacgaaggagtttgtttacctttgcaacctg
aaacggcaccaggaggaactgcacccgggtcaacagtgcacatacgccgaggaagaaaag
ggcaaactccgacctcaaaactacaacaactcggcgagagtcggcgcagagcctccggcg
ccggacgctcggggggaaactaagaaagcggcgaaaacggaggaaggaggagaagctgtg
gccgctgaagagttcttcacaacagtaaaaatcaaggcttcagacggagacgagctcaaa
gggagcgacgtccgccttggcattaaccagcattaccccagcttcaagccccctcccttc
ccttaccacaacaggtcccctgccagctcggtgacgtcagccaccaacttcaccacccac
aacatcccacaaaccttcagcacggctatccgctgcaccaagtgcggcaaaagctttgac
aacatgccggagctgcacaagcacatcctggcgtgtgcaaccgccagtgacaaaaagagg
tacacgccaaagaagaaccccatcccgctgcgccatttcgcaaaaacgcagcacggcgtc
ttgtccgccacgaattctgctcacgggctgaacgactccaacaggagcgaccacccaacc
aggtcgaaacccacccaggactctgcggtgaagctgaggttaaaggtcctcgggaagagg
aagaagaagctggtccaaagggtgatgccgcagaggaacaagtcggaccataactccaac
agaacggcgcctgcgcaggtgcacgacaagcaggaggtgtttgtctgcccccactgcagc
cgggagttcaccatgcgccgcagcagaaccaaacacatggccgtctgccccaggaaactg
agcgaggtgaagaaacggaaagaaggagggatctccgtgaccaaggaaaatgacgagaag
ctccgcatagttggtgaagacaaactgcaggcgtcgccgcagcacaagacgagactccag
acggccggactggggaagagagccgccatcctgccagtgcagaccgtcttcacaagcaaa
aggagtaaaataatcataaaggagagcatgcagcccaaagcggaggctccctctctgaac
gaactccccatggttcgcactttcaaccccgccatgcgtcagtacagcagggtgcagccc
aacgtcaaagggatccccatcaaaatcaccatcgtgaaacctcagcagagcgcgccgccg
gagggggagctgtcgtccacgcagagccaggaaaaagcagccagccgctctgagcagagc
ccctctccctga
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