Takifugu rubripes (torafugu): 101063337
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Entry
101063337 CDS
T02386
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101063337 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tru03009
]
101063337 (wdr43)
Ribosome biogenesis [BR:
tru03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101063337 (wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40
Utp12
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_WDR41
EIF3I
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RSE1_2nd
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
Tricorn_2nd
Beta-prop_WDR75_2nd
NBCH_WD40
Beta-prop_IP5PC_F
Paf1
Beta-prop_RIG_1st
SGL
CPSF_A
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
101063337
NCBI-ProteinID:
XP_011612673
Ensembl:
ENSTRUG00000009764
UniProt:
H2TIL9
LinkDB
All DBs
Position
2:2490964..2498756
Genome browser
AA seq
644 aa
AA seq
DB search
MAADGGSASVQLPCVFSPKTQQYLALCAQDGKLRIWNTDSKTLHQEYVPSAHLSATCICI
SWGPCRTLKERPQRKKRKSEAAQVEESADLLAMGTAAGTVLIYSTTKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTNIVEWDLQTGKTKSKWKADRGAVTSLCVSPDGKLLLSAG
QTIKMWDLDTKEVYRKFTGHSTAVTTLCFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFALSDEPQHIDLIASKSREEVMKLAVVCKDGQLHLFEHFLNGPCKKPLQPL
CTVQMSDTKDTPMPIPLLAAALRTDMQTLMLAYGNHLQPVMEKVEIDTAERCVCLTRDVQ
TSLSISMATTVSKVKTPIVNAKSKVLVPGLPGHQAPVKGATQGQEKRKTGTDTKEVQMTI
AERLGEIELSTKKGALKGTASLQTDHFAVLLVQGLESNDAHILNKVFQTHKDMIIKKTVA
QLPLPAVLPLLEKITERLQGHPFMAVLMTRWLKAVLMHHTSYLATLPDLVNQLGLLYHTI
ESRVKMFHKLTKLHGKLYLLMSQVAASDRKPTVTTVDREAKLVYEEESSDEDEASGDEGL
PHEDSDNWEEEEAMEEEDDDPESRSDSKANGEDDMEHENESEEE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgatggtggcagcgcttcggtccagctaccttgcgttttttcacccaaaaca
cagcagtacttagctttgtgtgcccaagacggcaaacttcgcatatggaatacagacagt
aaaacacttcaccaagaatacgtgccttcagctcatttaagtgccacttgcatctgcata
tcctggggaccatgccggacgctcaaggagaggcctcagaggaagaagaggaaatccgag
gcggcacaggtggaggagagtgcagacctgttggcgatgggcacagcagctggcacggtg
ctcatctacagtaccacgaagggagcgctgcactgtacgctggatggaggccacagcgga
ggggtaaattgtgtccagtggcaccccgaggacagtttattgtacagcggctcagatgat
acaaacatagtagaatgggacctgcagacaggcaagacaaaaagtaaatggaaggcagac
cgcggggccgtaaccagcctctgcgtcagccccgatggaaaactgctgctgtcggctggt
cagacaatcaagatgtgggatttagacaccaaggaggtctataggaaattcacaggtcac
tctacggctgtgacgaccctgtgcttcgccaccacacgacctcccgacagcaacggtctc
tattttctgtccggggcggcacacgatcgactgcttagtgtttggcaagtgcgagaggat
ggaaaggacaagaattcagtggtgtcatttgcgctgagcgacgagccgcaacacatcgac
ctcatcgcgtctaagagcagggaggaggtgatgaagctggcagtggtgtgcaaggatggg
cagctgcatttgtttgagcactttctaaatggtccctgtaagaaaccattacaacccttg
tgcacggtgcagatgtctgacaccaaagacacaccgatgccaatccccctgctggcggct
gccctgcgaacagacatgcagacgctgatgttggcctatggaaaccacttgcagcccgtc
atggagaaagtggagatcgacacagcagagagatgcgtctgtttgaccagggacgttcag
accagcttgtctatttcaatggcgaccaccgtatccaaggtgaagacgccaattgtgaac
gccaagagcaaagttctggtgcccgggcttcctggtcaccaagccccagtcaagggagcc
acacaggggcaagagaaaaggaaaacaggcacagacaccaaagaggtgcagatgacgata
gcggagcgactgggagaaattgagctctccaccaaaaagggagctcttaaaggaacagcc
tctctacagacggatcattttgcagtgctgctcgtgcaaggcctggagagcaacgacgcc
cacatcctaaataaagttttccagactcacaaagacatgataataaagaagacggttgca
cagttacccctccctgctgtgttacctttgttggaaaagatcacagaaaggctccaagga
cacccttttatggcagtgttaatgacgcggtggctcaaggctgtgctcatgcatcacaca
tcatacctggcaacgcttccagacttggtcaaccagctggggttgctttatcacaccatc
gagagccgagtgaagatgttccacaagctcacaaagctacacgggaaactgtacctccta
atgtcccaggtggcagcaagtgaccgaaagcccacagtaacgactgtggaccgcgaagct
aagctggtgtacgaagaggagtcgtctgatgaagacgaggcctccggtgacgaaggcctt
ccccatgaggattctgacaactgggaggaggaggaggcaatggaggaggaagacgatgac
ccagaaagtcgatcggactccaaagctaatggggaagatgacatggagcatgaaaatgag
agcgaagaggaatga
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