Takifugu rubripes (torafugu): 101063764
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Entry
101063764 CDS
T02386
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03013
Nucleocytoplasmic transport
tru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101063764
03015 mRNA surveillance pathway
101063764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101063764
Enzymes [BR:
tru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101063764
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101063764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101063764
NCBI-ProteinID:
XP_003977860
Ensembl:
ENSTRUG00000005966
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All DBs
Position
3:17071125..17074307
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AA seq
476 aa
AA seq
DB search
MMEASWATSVDMQVASAPAPQKVERRRSARRADINGNTDAGGSDDEGWLQQGDRVDLAQQ
SLLNKLIRHSLVLNRNRVEVQQRDPNSPLYSVKSFEELRLKADLLNGVYQMGFNRPSGIQ
ENALPLMLAHPPQNLIAQSQSGTGKTAAFCLAMLSNANPAHAWPQCLCIAPTYELALQIG
QVVEQMGKFCSNVKLVYAVRGNRMEKGTKVEEQIVIGTPGTVYDWCTKRKAIDPKKISMF
VLDEADVMIAMQGHRDQSIRIQRLLPKECQMLFFSATFEDSVWSFAEKIIPNPNIIRLKR
EEETLDNIRQFYMVCKDKEEKFAALCNLYGCLTIAQTIVFCKTRRMASWLAESMTKEGHQ
VGVLSGEMTVEQRAAVIERYRQGKEKVLVTTNVCSRGIDVEQVTLVVNFDLPVDLAGQAD
NDTYLHRIGRAGRFGKRGFAVNLVDSQRSMDIIEQIELHFNRKIKKLDMNDLEELD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagcttcgtgggcgacttccgtggacatgcaggtggcctcggcaccggcccca
cagaaagtggagcgacggcggagcgccaggagagccgacatcaacggtaacaccgacgcg
ggagggtctgacgatgaaggctggctccagcagggggacagggtggacctggcccagcag
tccctgctcaacaagctgatccgccattccctggttctgaacaggaaccgggtggaggtt
cagcagcgggacccgaactctcctctgtactcggtcaagtcctttgaggagctccgattg
aaagcggacctgctgaacggggtctatcagatgggcttcaacagaccttctgggatccag
gagaacgctctgcccctgatgctggcgcacccgcctcagaacctgattgcccagtcccag
tccggcaccggcaagaccgccgccttctgcctggccatgctcagcaacgccaacccggcc
cacgcgtggcctcagtgcctgtgcatcgcgcccacgtacgagctggccttgcagatcggc
caggtcgtcgagcagatggggaagttctgctccaacgtcaagctggtctacgccgtccgg
ggcaaccgaatggagaaaggaaccaaggtggaggagcagatcgtcatcgggacgcccggc
accgtctacgactggtgcaccaagaggaaggccatcgaccccaagaagatctccatgttc
gtgctggacgaggccgatgtgatgatcgccatgcagggccaccgggaccagagcatccgc
atccagagactgctgcccaaggagtgtcagatgctcttcttctccgccaccttcgaggac
tcggtgtggagttttgcagagaagatcattcccaatcccaacatcatccggctgaagcga
gaggaggagactctggacaacatcaggcagttctacatggtctgtaaggacaaggaggag
aagtttgcggcgctgtgtaacctgtacggctgcctgaccatcgcacagaccatcgtcttc
tgcaagacgcgcaggatggcctcgtggctggctgaaagcatgaccaaggaaggccaccag
gtgggggtgttgagcggggaaatgacggtggagcagagagccgccgtcatcgaacgctac
aggcagggaaaggagaaggttctggtgaccaccaacgtctgctccagaggaatcgatgtg
gaacaggtgacccttgtggtcaactttgacctgccggtggatttagccgggcaggccgac
aacgacacgtaccttcaccggatcggccgcgcgggacgcttcgggaaacgggggttcgcc
gtcaacctggtggacagccagcgcagcatggacatcatcgagcagatcgaactccacttc
aacaggaaaattaagaaactggacatgaacgacctggaggagctggactga
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