Takifugu rubripes (torafugu): 101063938
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Entry
101063938 CDS
T02386
Symbol
lmo7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101063938 (lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101063938 (lmo7)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
101063938 (lmo7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101063938
NCBI-ProteinID:
XP_029700525
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All DBs
Position
1:15859874..15899047
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AA seq
1469 aa
AA seq
DB search
MKGQTGVMEWREQSSLGCAEAYLEAQRWIEAVTKKTFGSDDFRSALENGILLCDLINKIK
PGTIKRINRLPTPIAGLDNLNVFLRACGKLGLKDAQLFHPGDLQDLSSRVTVKDQETNRR
LKNVLITIYWLGRRAQCDQLYDGPYLNFKAFEGLLGTALYKALHESPSLRDSSIRDSGFG
DSWYSEREEPPHFRGAQAGGGGSVHKRDNSLDSLNSLSSQAHSISSDTTIKGSSEGCCSD
TEADSVFKMTDNTQNISYRRSVSITPKATAPFNQFLPSKDKSSGYVPAPLRKKRAERNED
IRHSWTSASTEEDRILTRPWQMQESIDGSKSTNDIQLPVDAGARRYEQLQNFRDQIKESE
SQWQDDLSKWKNRRRSVNSDIVKKKEEREKIEQITSSDNYSRRSKTFREMQDERETKGHL
TSLSYLEEDIFDTSVVSPQPRKFPARSQTIDTPYYSYDTHDRSLKQDEPPTASTATGRAA
SPPTSREVDIVDSPAGRDQVQSTTTSTRHSSFHSSQSTAVAPLRSSLGPSYSDTAKTEKT
TTAASSFSSVQKVREPTRPLLRTKAEVEIPSSGAQTKHQPQPSSMESNPPALSRVSASLP
RSYQRSDSARLTSVVAPRPFGAQTSRITSLPRAFTVDDPQSRVNGDGSKKSAAPSRYQQF
MTSEDEADSSSAHSSNEEEEEEEEVEKDRTTVTSTSVSTVLPPVKDEALVSSAPVSESVK
ESHCEMRISLNQKPNSSRDFGFQAVWDSTGARVMSVQPGSQAEMCQLQSGDEVLTVNRHQ
VAEMSYTDWKSRMEEALQEGSLVMDIRRHGKDNWDRAQPSLPFKSHKTINLTSTDHPILL
GSSEKSSVNASLDFTSRVSTDTQAPREPPTRTVIDVASSGVNGGFCEEPLNMRNKESESI
SLKNLKRRSEFFEKGGPEAVMPDILVPPIVPPASRWSWDPEEERRRQEKWQKEQERLLQE
KYKRDQEKLQAEWLKAQQEIAKNTEQQQQPRTLEVNSQSPVSISPRAPLSPLKQATSHPW
EEEERKRKEEQEQQWQAERRRREEEEREQQRLQAERRRREEEEREQQRLQAERRRKEEEE
EQERQRLQAERRRKEEEERRRLEEEELLWQKRRAQEREDERRRQEAAEQLRRERERAAQQ
QQQWHGSSYGFSNSQSSLSFTDRMKSKSTPQLDQDEKTPWKGVNVQQHLWWERPLPGGSN
TQAQSQRAASEQDLKRRYILDSIRLRTLERANSRAVGDSRGQQPPTQANVERQQILNEMK
KKIPLLTDSSWIRQGSSSTASNVRETNLPPMRRGESLDNLDAPSTWRSSWTPRSNSFVPN
HNPLPSAFSGSDVISSGGSGVQRPSTLPTSYSVGHLRGGAGTPSFPSSKQSPLPSPLSPT
RSPEPWNNAGSRSVSGKKICTFCDIPLGKGAAMIIESLGLCYHLSCFKCFDCKAELGGSE
AGAEVRIRNKQLYCNLCYMRFKTATPTEM
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcagactggagtgatggagtggcgagagcagtcctctctcggctgcgccgaa
gcctacctggaggcgcagagatggattgaggcagtgaccaagaaaacgtttgggagcgac
gacttccgatcggcgctggagaatggcattctgctgtgcgatctgatcaacaagatcaag
cctggtaccatcaagaggatcaacagactgcctacacctattgctggactggacaacctt
aacgtcttcctcagggcctgtgggaagctgggacttaaagacgcacagctctttcaccct
ggagatctccaagacctgtcctccagagttacagtcaaggaccaagagaccaataggagg
ctaaaaaatgtgctgatcactatttactggctggggagacgagctcagtgtgaccaatta
tatgatggaccttacctaaattttaaggcctttgagggattattgggcacagcgctgtac
aaggctctgcatgaatcacccagtctgagagacagcagcatcagagacagcggatttgga
gatagctggtactccgagcgagaggagccgccccatttcagaggagcgcaagcaggagga
ggaggaagtgtgcacaagagagacaattccctggacagtttaaactctttgagctctcaa
gcccacagcatctcatctgacaccacaattaaaggcagcagcgagggttgctgcagtgac
accgaggcagactctgtctttaagatgactgacaacacgcagaatatcagttaccgccgg
tcggtgtccatcacccccaaggccaccgcaccctttaaccagttcctcccatctaaagat
aaatcctcaggctacgtccctgcaccactgaggaagaaacgggctgaacgcaacgaagac
attcgccacagctggaccagcgcgtccactgaagaagaccgcatcctcaccagaccgtgg
caaatgcaagagagtatcgatgggagtaaatcaacgaatgatattcagctaccggtagat
gccggcgctcgacgttatgaacagctgcagaactttcgggaccagataaaggagagtgag
agtcaatggcaagacgacctgagcaagtggaagaaccggcgcaggagtgttaattcagat
atagtgaagaagaaagaagaacgggagaagatagagcaaatcacatccagcgacaattac
agcagaaggtcaaagaccttcagggagatgcaagacgagagagaaactaaaggccatctc
acttctctgtcttacctggaggaggacatttttgacacgtctgttgtctcccctcagcct
cgaaaatttcctgccaggagtcaaactatcgacactccttactattcctatgacacccac
gatcggtccctgaaacaggacgaaccccccactgcctccacagccacaggcagggctgcg
tcccctcccacctcacgggaagtggacattgtggacagtcctgccggcagagaccaagtc
cagagcaccactacttccaccaggcacagctctttccacagttcccagtccactgcagta
gcaccattacggagcagtttgggcccatcatacagtgacacagccaaaacagagaaaacc
acaactgctgcatcctcctttagctcagtgcaaaaggtgcgcgaaccaacccgaccattg
ttgcgcacaaaggctgaggtggagatcccttcctctggtgctcagactaaacaccaacca
cagcccagctcaatggaatccaaccctcccgcgttgtctcgggtttctgcctccctcccc
aggagctaccagagatcggacagtgcacgtctaacctcagttgtagcgccaaggcctttt
ggggcccagacgtcccgcatcacctcacttccccgagcctttacagtggatgaccctcag
agccgcgtcaacggtgatggttcaaagaagtcggcggcaccgagtcgctatcagcagttc
atgacctctgaggacgaggctgactccagctcagcccacagcagtaatgaggaggaggag
gaggaggaggaggttgaaaaagacaggaccaccgtgacaagcaccagcgtgtccactgtc
cttccacctgtcaaagatgaagctcttgtcagctctgctccagtcagtgaaagtgtcaaa
gaaagccactgtgaaatgaggatcagcctgaaccagaagcccaacagcagcagagacttt
ggtttccaggcagtctgggattcaactggtgctcgtgtcatgtccgtccaaccaggcagc
caggcagaaatgtgccagcttcagtccggggatgaagtgctgacggtgaacaggcaccag
gtggcagaaatgagctacacagactggaaatctcgcatggaggaggccctgcaggagggc
agcctggtcatggacatacgcagacatggaaaagacaactgggacagagctcagccttcc
ctgccatttaaaagccataagaccatcaatctgaccagtacggatcatccgatacttcta
ggttcctcagaaaagagctccgtcaacgccagcctggatttcacctcgcgagtgtccaca
gatacacaggcgcccagagagccccccacccgcacggtcatcgatgtggcatcaagtggt
gttaatggaggattctgtgaggagccgctcaacatgaggaacaaagagtcagaatccata
tctctgaaaaacttaaaacggcggtcagagttttttgaaaaaggtggcccagaggcagtg
atgccagatatacttgtgcctcccatcgttccacctgccagccgctggtcctgggaccca
gaagaggagcgaagaagacaagagaaatggcagaaggagcaggagcgcctcctacaggag
aaatataagcgtgaccaggagaaactacaggcagagtggctgaaggctcaacaggagatt
gcaaagaacacagagcaacagcagcagcccagaacactggaggtgaacagtcagtcacca
gtcagcatcagcccacgggcccccctctctcctctcaaacaagccacctctcacccttgg
gaggaggaggagagaaagaggaaggaggagcaggagcagcaatggcaggcggagaggaga
aggagggaagaggaggagagggagcagcaaaggctgcaggcggagaggagaaggagggaa
gaggaggagagggagcagcaaaggctgcaggcggagaggagaaggaaggaggaagaggag
gagcaagagcggcagcggctgcaggcggagaggagaaggaaggaggaagaggagaggagg
aggctggaggaagaagagctcctttggcagaagaggagagcgcaggagagggaggatgag
aggaggcgccaggaagcagcagagcagctgcgcagagagcgggagcgagcggcccaacag
cagcagcagtggcatggcagctcttacggcttttccaactcccaatcttcactttccttc
acagacaggatgaaatccaaatcgactcctcagcttgaccaagacgaaaaaactccttgg
aaaggtgtgaatgtgcagcagcatctctggtgggaacgaccactgccgggtggatctaac
acacaggcccagagtcagagggctgcatcagaacaggatctgaagaggagatacatcctc
gattctatcagactcagaacgttagagagagcaaacagcagagctgtgggtgacagcagg
ggtcagcagccccccacacaagccaacgtggaacggcagcagatcctgaacgagatgaaa
aaaaagatcccgctgctgacggacagcagctggatccgtcagggctcctccagcacagcc
agcaacgtcagggagaccaatttgccacccatgcggagaggtgagtctcttgacaacttg
gatgcacctagcacctggcgttcatcatggacacctagaagcaactcttttgtccccaac
cacaacccgctgccgtctgccttctctggcagcgatgtaatttccagcggtggttctggg
gtccagcggccttctactttgcctacgtcgtactctgtgggccacctccgaggaggggca
ggaacgccctcgttcccttcatccaagcagtcgcccttaccttctcctctgtcacccact
cgctctcccgaaccctggaataatgcaggaagcaggtcagtgagtggcaagaaaatctgt
acgttctgtgacatcccactggggaaaggagccgccatgatcatcgagtccctcgggctc
tgttatcatttgagctgttttaagtgtttcgactgtaaggctgaacttggaggctcagag
gcgggggcagaggtccgaatacgaaataaacaactctactgtaacctctgctacatgcga
ttcaaaactgccacgcccactgagatgtga
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integrated database retrieval system
