Takifugu rubripes (torafugu): 101063968
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Entry
101063968 CDS
T02386
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101063968 (zc3h12b)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101063968 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
101063968
NCBI-ProteinID:
XP_003971252
UniProt:
H2U1P2
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Position
15:12587022..12598532
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AA seq
834 aa
AA seq
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MEKQSWRDDIVDVREVERATDDSEDASSSESESDERQCKRLQVGKKKKEPLTGTKPHRQL
CRSPCLDRPSFSQSSTAQEIREDEASAALGSRTASDREYQSKMEFALKLGYSGEQVETVL
NKLGAAALINDVLAELVRLGNKVEPEIQPCSGAAVANIARSACAKENPSPEVSVEEDSMD
TFDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITVFVPAWRKEQSRPD
AVITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSDGIIVSNDNYRDLQ
NEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQPCPYGK
KCTYGHKCKYYHPERINQPLRSVADELRAFAKLSAVKTMSEGALAKCGTGPVTIKGDSNS
EAKRVAPKRQSDPSIRSVACEPPEALSVARKSEANSVPSLVSALSVPTMQPAKSHAAGAL
NTRSASSPLPGSLQFAHSSLSSLEHMSSVHYPPILVTNSHGASVTYSEQFPKYDSISDHG
YYSLHSDFSNMSMSSMHNVDSFCSVEHEHGVYQRNPSHCTESCLSHSNSDSFSSYGDMYP
SSVEGSLEDSMKGQQQPQGRMQSFSHGFRHEPLSRVQSYGPEEPKQAPHKQPGSHLAPRI
QHVAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYDSNPMRQRRPPLC
REQHASWDPLPCGTESLEYHSYPLSNSLMPCCERVMVRSMPEKMEQIWSSLWEVPSAGEH
QERHAIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVTKLRSCH
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacaatcatggagggacgacatcgttgatgtaagagaggtggagcgtgccact
gatgattctgaggatgcaagcagctcggaaagtgaatcagacgagcggcagtgcaagagg
ttgcaggtaggcaagaagaagaaggagcctctgaccggcaccaagccccaccggcagctc
tgtcgctccccgtgcctcgaccggcccagtttttcccagagtagcaccgctcaagagatc
cgtgaggatgaggccagcgccgcgctggggagcaggactgcgagcgacagggagtaccag
tccaagatggagtttgctttaaaactggggtactcgggagaacaggtggagacggtgctc
aacaagctcggcgccgctgcgctcatcaacgacgtgctggctgagctggtgcggctcggc
aacaaagtggaaccggaaatccaaccttgcagcggcgcggccgttgcaaatatagcacgg
tctgcctgcgcgaaggaaaacccgagtccggaggtgtccgtagaggaggattccatggat
actttcgataacctcaggcctattgttattgatggctcaaatgtggcaatgagccatggc
aacaaggaggtattctcttgccgtggtatccaacttgccgttgaatggttcttggagaaa
ggacataaagatatcactgtgtttgtcccagcctggagaaaggaacagtcaaggcctgat
gccgtcataaccgatcaggaaatccttcgcaagctggaaaaagagaagatcctggtcttc
actccctctcggagagtccaaggcaggagagtggtgtgctacgatgatcgcttcatagtg
aagctggcttatgattctgatggaattattgtgtcaaatgacaactacagagacttgcaa
aatgagaaaccagagtggaagaagttcatagaagagcgtctgctaatgtactcctttgtc
aatgacaagtttatgccacccgacgatcccctgggaagacacggcccaagcttggaaaac
tttctccgcaagcgtcctgttgttccagagcacaaaaagcagccttgtccttacgggaaa
aagtgcacatatggacataagtgcaagtactatcacccagagcgcatcaaccagcctctg
cgctctgtggcggatgaacttcgggctttcgccaaactctctgccgtcaagaccatgagc
gaaggggctctggctaaatgcggcactggtccggtaactataaagggggacagcaattct
gaggccaagcgcgtggcgcccaaacgccagtccgaccccagtattcgctcggtggcctgc
gagcccccagaggcgctgtcggtcgccaggaagtctgaggccaactcggtgccttccctc
gtgtctgctctcagcgtgcccaccatgcagcccgccaagagccacgcagccggagctctg
aacacacgctcagccagcagtccgttgccgggttccctgcagttcgctcacagttccctg
agctctctggagcacatgtcgagtgtgcactatcctcccattttagttacgaacagtcac
ggcgcctctgttacttacagtgaacaattcccaaagtatgactccatcagtgaccatgga
tattactcactgcacagtgatttttccaacatgagcatgagcagcatgcacaacgtagac
agtttctgtagcgtggagcacgagcatggcgtctaccagagaaaccccagtcactgtacc
gagtcctgcctcagccattccaacagtgactctttctcctcttacggggacatgtacccg
agctccgtggagggtagcttagaggacagcatgaaagggcagcagcagccacaaggcagg
atgcagagtttctcgcacggctttcgtcacgaaccgctgtccagggtgcagagctacgga
ccggaagaacccaagcaggctccccataagcagcccgggtctcatttggcgccacgcatc
cagcacgttgcggtaggggcgaggtcgagctgccctggggactatcctctaacccaaaat
gtcctcccgcctctgtcctcacaaccgacgcgctctctcggcatgacgcgcatggatagc
atatcggattcaaggctgtacgacagcaatccaatgagacagaggcgtcctccactgtgt
cgcgagcagcatgcgagctgggaccctctgccctgcggcaccgagtccctcgaatatcac
tcatatccactcagcaacagcctgatgccgtgctgcgagcgggtgatggtccgcagcatg
ccagaaaagatggagcagatctggagctcgctatgggaggtcccgtctgcaggtgagcac
caggagcggcacgccatcccggaccaccagtaccaaacatatcggaacctttgtaatatc
tttcccgcttacgtagtccactcggtaatggagaagaaccctcatttgacggacccccaa
cagctggctgccgtcattgtcaccaaactgaggtcgtgccattga
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