Takifugu rubripes (torafugu): 101064096
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Entry
101064096 CDS
T02386
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04140
Autophagy - animal
tru04148
Efferocytosis
tru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101064096 (vps16)
04148 Efferocytosis
101064096 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101064096 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101064096 (vps16)
Membrane trafficking [BR:
tru04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101064096 (vps16)
Hops complex
101064096 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
101064096
NCBI-ProteinID:
XP_003966794
Ensembl:
ENSTRUG00000011267
LinkDB
All DBs
Position
8:10152025..10161006
Genome browser
AA seq
834 aa
AA seq
DB search
MTFITANWNPLGDAFYRKTELYDMCWDLKDALRDCLVAAAPYGGPIALLRKPLRCSPSSR
PQLEIYSASGFAITSFPWKSGPLVHLGWTITDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVVQNHVLEAKVFHSPFGTGVAIISGSSHFTLATNVDELKLRRLPEVPGLQGKPLCWAVL
VQDRQIKVLLSSGPELYILDDTSCSEVHPPWLSPQAGSIIHMSVSFSYKYLALFTDTGHL
FTASSDLQNKLSEIDTKRSTAPEQMVWCRRPNSQQPSVVLLWDRLLMVAGVCNDTIQFPI
EDQCVLVGEMDGVRILSTRSHELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLRELKEQSMLEEAVKQCVGAARYEYDPQTQKSLLRAASFGKCFLADFSADPFVETCR
ELRVLNAVRVSSVGLPLTYPQFKHLTLQVLTDRLVYRQLYPLAIKVCHYLKIPDYHGVSR
VLRHWASCKVQQKDLSDEAIAKAVCAKVGDSPGFSYSHIAAKAYECGRAELAIKLLDFEA
RSGEQVPLLLKMKRSHLALSKAVESGDTDLVYMVVTHLKNEMNRGDFFMTLRNQPVALSL
YKQFCKLQEQETLKDLYNQDDDHQELANYYVAASYREKRMDIRLSLLQSAVDEYNKAKND
FAAKATEDEMRLLRFQRKLDEDKATELLGLSLQATMEALLALGFHKQAEQLYRDFKVPEK
RYWWLKLKSLAKKEEWEELEKFSKTKKSPIGYLPFVEVCMKRNNKYEAKKYVSRVMPEQK
VRAHLAISDLEGAADAAIERRNESEIGIVLSRCAASDHLLIERLNRARTSTVKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcatcacagccaactggaacccgctgggagatgcgttttatcgtaaaactgag
ctgtatgacatgtgctgggacttgaaggacgccctcagagactgtcttgtggctgctgct
ccatatggaggaccgatagctctcctaagaaaacctcttagatgttctccgagttctcgt
cctcagttggagatttattctgcgtctgggtttgccatcacaagcttcccgtggaagagt
ggtccccttgtccatcttggttggacgattaccgatgagttgctatgtattcaggaagac
ggatctgtactgatctatgatctgtttggttccttcaagaggcatttcagtatgggtcag
gaagtggttcagaatcatgtcctggaagccaaagtattccactctccatttggaacaggt
gttgccatcatatctggctcctcccattttaccttggcaaccaacgttgatgaattgaaa
ctgcggaggttacctgaagtcccaggtctgcaggggaaacctttgtgttgggccgttctc
gttcaggacagacaaatcaaagtcctcctgtccagtggccctgaactttatatcctggat
gacacgtcctgttctgaagtgcatcctccatggctcagtccccaggctggcagtatcatc
cacatgtctgtgtcgttcagctataaatatttggccctttttactgacactggacacctg
tttacagcctcttctgatctccagaacaaactgagtgaaattgacaccaaaaggtcgaca
gcacctgaacagatggtctggtgtcgcagaccgaacagtcagcaaccgtctgtggtgtta
ctgtgggacaggctgctcatggtagctggagtttgtaatgacacaatccagttccccatc
gaggatcagtgcgttttggttggagagatggatggagttcggatcctcagcacgaggagc
cacgagctgcttcaggaagttcctctggtctgtcaggatatcttcaagattgcctccatg
gcccctggagctttgctgctggaggcccacagggagtacgagaaatcaagtcagaaggct
gacgagtacctgagggagctcaaagagcagagcatgctggaggaggcagtgaaacagtgt
gtgggggctgctcgatacgaatatgacccccagacccagaaatctctgctgcgggcggcg
tcgtttggaaagtgttttctggcggacttcagcgcagatccgtttgtggagacctgcaga
gaactgcgagtgctgaacgccgtccgagtgagcagcgtggggctgccactcacatatcct
caattcaaacatttgactctccaggtgctgactgacaggctggtgtaccggcagttgtac
ccactagcaataaaagtctgccattacctgaagattccagattatcatggtgtcagcaga
gtcctcagacactgggcgtcctgcaaggtgcagcagaaggacctgtctgatgaggccata
gcgaaggctgtgtgtgcaaaggtgggcgactcgcctgggttttcttactctcacatcgca
gctaaagcgtacgaatgtggacgtgctgagctcgctatcaagctgttggattttgaggct
cggtctggagaacaggttcctctgctgctgaagatgaaacgcagtcatctggctctcagc
aaagctgtggagagtggagacactgacctggtttacatggttgtgacccatctaaagaat
gagatgaaccgaggagatttcttcatgaccctgaggaaccaaccagtcgcactgagtcta
tacaaacagttctgtaaacttcaggagcaggaaactctgaaggatctttataaccaagat
gatgatcaccaggagttggccaactactatgttgctgccagttacagagagaagaggatg
gacatccgtctgtccctcctgcagagtgccgtcgatgaatataacaaggcaaagaacgat
tttgctgcaaaggccaccgaggacgagatgcgactcctgcgttttcaacgaaagctggac
gaggataaagcaacagaactcctgggtctgtctttacaggccacgatggaggctctgttg
gctttagggttccataaacaagcagaacaactttacagagacttcaaagttccagaaaaa
aggtattggtggttaaaattgaagtctctggcaaagaaagaggagtgggaggagttagag
aagttttccaagaccaaaaagtctcccatcggctacctgccttttgttgaagtttgcatg
aagcgtaacaacaagtacgaagccaagaaatatgtttctagggtgatgccagaacagaag
gtccgggctcacctggcaatcagtgatcttgagggggctgctgatgctgcgattgagcgc
aggaatgagtcggagattgggatagtcctctccagatgcgccgcctctgatcaccttttg
attgaaaggctgaaccgagccagaaccagcactgtgaaaaaataa
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integrated database retrieval system
