Takifugu rubripes (torafugu): 101064262
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Entry
101064262 CDS
T02386
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101064262 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101064262 (taf5)
03036 Chromosome and associated proteins [BR:
tru03036
]
101064262 (taf5)
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101064262 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
101064262 (taf5)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101064262 (taf5)
STAGA complex
101064262 (taf5)
TFTC complex
101064262 (taf5)
SAGA complex
101064262 (taf5)
SLIK complex
101064262 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD_LRWD1
LisH_TPL
CDK5RAP3
VPS8_N
VID27
IMUP
Urb2
DUF1631
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
101064262
NCBI-ProteinID:
XP_011611342
Ensembl:
ENSTRUG00000014486
UniProt:
A0A674NZA1
LinkDB
All DBs
Position
17:15408381..15412956
Genome browser
AA seq
752 aa
AA seq
DB search
MAAVQGGIVDTVDKKDIKAEPSEDGIGNNNNNGNDNRMLSPSPSSSSSSGNNNNNNTAAA
ATVDQQTLVAVLQFLKKNKLNDSVEILRREAGLPEDSLDIKGSDPGAGGAAGSANLEAVD
AATLLNRVTVSASAAAQPQVKDSAGEDQPDVNVVLSAYSQQGDPALYQAYYSGLKRFIES
VLDCHRAELSQVFYPLFVHMYLELVYNNHENEAKAFFQKFSGDQECYYEDDLRVLSSLTK
KEHMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPR
SKSQIDAMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKK
DSMGSKSKKQDPNAPIQTRIPLPELKDSDKLDKIMYMKEATKRIRLGPDALPSICFYSFL
NAYQGLTGVDVTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERI
MDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYP
VWDVSFSPHGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADVTCTRFHPNSNYIATGSS
DRTIRMWDVLNGNCVRIFTGHKGPIHALDFSPSGKFLASGATDSRVLLWDIGHGLMVGEL
KGHTDTVYTLKFSRDGEILASGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSQE
LILGTYMSKSTPVVHLHFTRRNLLLAAGAYNP
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgcagggtgggattgtcgacacggttgacaaaaaagacataaaagctgaa
ccatctgaggacggcattggcaataacaacaataatggaaacgacaatcggatgctatct
ccatcccccagctccagctcttcttctgggaacaataataacaacaacaccgcggcagca
gccacggtggaccagcagacgctggtggcggtcctgcagttcctcaaaaagaacaaactg
aacgattctgtcgaaattttgcgtcgtgaagcgggattaccggaggattccctcgatata
aaaggaagcgatccaggcgcagggggtgctgcgggcagtgcgaacctcgaagccgtggat
gcggccactcttctgaaccgagtgaccgtctcggcatcggctgccgctcagccgcaggtc
aaagattctgcaggtgaagaccagccggatgtcaatgtggtgctgtcagcttacagccaa
cagggagatccagcactctatcaagcgtactacagcggcctgaagaggtttatagaatcc
gttttagactgccacagagctgaactgtcccaggtcttctacccgctgtttgtacacatg
tatcttgagctggtgtacaacaatcatgaaaatgaggcaaaggcattctttcaaaagttc
agtggagaccaggagtgctactatgaagatgacctgcgtgttctgtccagcctgacaaaa
aaagagcacatgagaggcaacgagaccctgctggacttccgtaccagcaagtttgtgctg
cgcatttccagagattcttaccaactgctgaagaggcacctgcaggagcgacagaacaac
cagatctggaacatcattcaggagcacctgtacatcgacatctttgatggaatgccacgg
agcaagagtcaaatcgatgccatgtctggcagcctggctggagaagccaagcgcgaggcc
aacaaggctaaggtttattatgggctgctgaaggagccagaaattgagctacctctagat
gatgaggatgaggaggcagagaatgaagagggtaaacccaagaagaagaaacccaagaag
gacagcatgggctctaagagcaagaaacaagatcctaatgcaccaatacagaccagaata
cctctaccggaactaaaggattcagataagctggacaaaatcatgtacatgaaggaggct
accaagaggatccgtctggggccagacgcccttccatccatttgtttttattcattcctc
aatgcataccagggtctgactggagtggatgtgacggatgactcgagcttgattgcgggg
ggctttgctgactccacagtcagggtgtggagcgtcacgccgaaaaagctccgcaaggtc
aagtctgcagcagacttaaatctgattgacaaggagtccgatgacgtgctggagaggatc
atggatgagaagacatccagcgagtcaaagattctccatggacacagtggcccagtgtat
ggtgtcagtttcagtccagacagaaattacttattgtcgagctctgaagatggaacagtt
cggctgtggagtctccaaacttttacgtgtctagtgggttacaaaggccacaattatccc
gtctgggatgtcagtttttccccacacggatactactttgtctcagggggacacgaccga
gtggcccgcctgtgggcaacagatcactaccagcctctgcggatattttcgggtcacctc
gctgacgtcacatgcacccgcttccaccccaactccaattacatcgctacggggtcatcc
gatcgcaccatccggatgtgggatgtcctaaatggcaactgtgtccgcattttcaccggg
cacaaggggccgattcatgcactggatttctctcccagtgggaagttcttggcttcgggg
gccaccgatagcagagtgctcctgtgggacattggtcacggactcatggtgggagagctg
aaaggacacactgataccgtctacaccctgaagttcagtagagatggagagatccttgcc
tccggttccatggacaacacggtgcgcctgtgggatgctacgaaagcatttgacgatttg
gagactgatgatttcacagcagctactggacatatacatttacaagacaactctcaggag
cttattcttggtacatacatgtctaaatctacgcctgtcgtacacctccacttcacgcgc
aggaacctgctgctagcagccggtgcctacaacccgtga
DBGET
integrated database retrieval system
