Takifugu rubripes (torafugu): 101064446
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Entry
101064446 CDS
T02386
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03020
RNA polymerase
tru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101064446
09124 Replication and repair
03420 Nucleotide excision repair
101064446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101064446
03400 DNA repair and recombination proteins [BR:
tru03400
]
101064446
Enzymes [BR:
tru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101064446
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101064446
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101064446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
101064446
NCBI-ProteinID:
XP_029688000
Ensembl:
ENSTRUG00000008631
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQIQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTSECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFXFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYEKLDDDGLIAPGVRVSGEDVIIGKTVTLPDNEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaccaagacgaagacaaccaatatgatgaagatgatgatgaaatcactcctgat
ttgtggcaggaagcatgttggatagtcataagctcttattttgatgagaagggtttggtc
cgacagcaactggattcgttcgatgagttcatccagatgtctgttcagaggattgtagaa
gatgcaccacccattgacctgcaggcagaagctcagcacacttcaggagaggtggaggaa
ccgcctcgttatctactgaagtttgagcagatctacctgtccaaacccacccactgggag
agggatggagcaccatctcccatgatgcccaatgaagcccgactgcgaaacctcacgtat
tcagctcccctgtatgttgacatcacaaagaccatcatcaaggagggggaggaccagatc
caaacacagcatcagaaaacattcattggtaaaatccccatcatgctccgctccacatac
tgcctcctgagtggcctgacagatcgagacctttgtgagctgaatgagtgtccgcttgat
cctggaggctatttcatcatcaatggttctgagaaggtgcttattgctcaggaaaagatg
gctaccaacaccgtgtacgtcttcgccaaaaaggattccaaatacgcctacaccagtgag
tgtcgttcatgtttggagaactcctctcgccccaccagcaccatctgggtcagcatgatg
gctcgaggaggacagggggtgaaaaagagtgcaattggtcagaggattgtgtctacgctg
ccttacatcagacaggaagttcccatcatcatcgtgttccgagcactgggatttgtgtcg
gacagagacatcctggaacacatcatctatgactttgacgaccctgagatgatggaaatg
gtgaagccctctctggatgaagcttttgtaattcaggaacaaaatgtggcattaaacttt
attggttcccgaggagcaaaaccaggtgtgacaaaggaacgaagaatcaaatatgctaaa
gaagttctgcagaaagagatgctgccacatgttggagtcagcgatttctgcgagaccaag
aaggcttatttcttggggtacatggtacacaggttgctgctggctgcccttggcagacga
gagctggacgacagagatcactacggcaacaagaggctggatctcgccgggcccctgttg
gcatttntgttcagaggcatgtttaagaatctgctgaaggagatccgaatttacgctcag
aagttcatcgacagaggaaaagactttaatctggagctggccattaaaaccagaatcatc
tcagatggcctgaaatactctttggctactggaaactggggagatgtaaagaaagcacat
caggccagagctggagtgtctcaggtgttgaaccgcctcacctttgcgtccactctttcc
catctccgtcgtgtcaactctcccatcggaagagatggaaaactggcaaaaccccgacag
ttgcacaacacgctgtggggcatggtgtgtcccgccgaaacgcctgagggtcacgctgtg
ggtctggtgaagaatttggccctcatggcctacatctctgtgggctctcagccatcaccc
atcttggagtttctggaagagtggagcatggagaacctggaggagatctcacctgcagcc
attgcagatgccacaaagatcttcgtgaatggatgctgggttggaattcacaaagatcct
gagcagctgatgaacactttgaggaaactccggagacaaatggacatcattgtgtctgag
gtgtccatgatcagagacatcagagagcgggagatcagaatctacacagatgcaggacgg
atctgtcgaccgctgttaattgttgagaaacagaaactgctcctgaagagacgccacatc
gatcagttaaaggagagggagtacaacaattacagctggcaggacttggtggcaagcggt
gtggtggagtacatcgacacattggaggaggagacggtcatgcttgccatgactccagat
gacctccaggaaaagggcgtggcttattgctcaacgtacactcactgtgagatccatccg
tccatgatcctgggagtttgtgcttcaatcattccgttccctgatcacaatcagtctccc
agaaacacgtaccagtctgccatgggtaaacaggccatgggggtctatatcaccaacttc
catgtgaggatggacaccttggctcacgtgctctactaccctcagaaacctctggtcacc
acacgatccatggagtacctgcgcttcagggagctgcctgcagggatcaactccatcgtg
gccatcgcctcctatacgggttataaccaggaggactcggtgatcatgaaccgctcggcg
gtggaccgaggcttcttcagatctgttttctatcgatcctacaaagaacaagagtcaaag
aaaggttttgatcaggaggagatctttgagaaacccacgcgtgaaacctgccaaggtatg
agacacgccatctacgaaaaactggatgacgacggcctcatcgctcctggggtccgtgtt
tctggcgaggacgtgatcattgggaaaacggtgacgctgccagacaatgaagatgagctg
gagagcaccaaccggcgctacaccaagagggactgtagcacctttctgagaaccagtgag
actggaattgtggatcaggtgatggtgacactgaaccaggagggctacaagttctgcaag
atcagggttcgatcggtccggatcccacaaattggagacaagtttgctagccgacatgga
caaaaagggacctgtggcatccagtacagacaggaagacatgccgttcacctgcgaagga
ataacgcctgacatcatcatcaatccacacgccatcccatccagaatgacagttggacat
ctcatcgagtgtctgcagggcaaggtttcggccaataaaggtgagattggagacgccacc
ccgtttaatgatgccgtgaacgtgcagaaagtgtccaacctgctgtcagaatatggatat
cacctgagaggaaatgaggttctgtacaacggcttcactgggagaaaactaacttcacag
attttcattggtccaacttattatcagcgtctaaaacacatggtggacgataagattcat
tcaagggcccggggcccggtccagatcctcaacaggcagccgatggagggccgatcacgt
gatggcgggctccgttttggtgagatggaacgcgactgtcaaattgctcatggtgctgct
cagttcctcaaagagcgcctgtttgaagcttcggatccgtaccaggtccacgtttgcaac
ctgtgtggcctgatggccatcgccaacacacgcacacacacatacgaatgtcgtggctgc
cgcaacaagacccagatttctctcgttcggatgccgtacgcctgcaagcttctgttccag
gagctcatgtcgatgagcatcgctcctcggatgatgacgtcatag
DBGET
integrated database retrieval system
