Takifugu rubripes (torafugu): 101064469
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Entry
101064469 CDS
T02386
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tru03009
]
101064469 (ddx55)
Enzymes [BR:
tru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101064469 (ddx55)
Ribosome biogenesis [BR:
tru03009
]
Eukaryotic type
Pre-60S particles
Helicases
101064469 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
YbjM
RPN2_C
Motif
Other DBs
NCBI-GeneID:
101064469
NCBI-ProteinID:
XP_003965459
Ensembl:
ENSTRUG00000018525
LinkDB
All DBs
Position
6:complement(8566453..8569935)
Genome browser
AA seq
597 aa
AA seq
DB search
MDNTTDGTWDSLPVKLNDGILETLNELQFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPIIELLLKREEKLKKMQVGALVITPTRELALQISEVMQQFIHKFPQFTQILLIGG
SNPIEDVEKFKDQGANIVIATPGRLEDMFKRKADGLDLACLVKSLEVLVLDEADRLLDMG
FEASLNAILGHLPKQRRTGLFSATQTQELEKLVRAGLRNPVRIAVKEKGVAASATQKTPS
RLSNYYTICRSENKFNNLVAFLRQHKHEKNLVFFSTCACVEYFGRALETLIKKATVCCIH
GKMKDKRNKIFADFRALKSGILVCTDVMARGIDIPDVDWVLQYDPPSSASAFVHRCGRTA
RIGNQGNALVFLLPMEESYVNFLSINQKCPLQKMPPINDVVDVLPKVKAMSLADRATFDR
SMRAFVSYVQAYAKHECSLIFRVKDLDFGSLARAFALLRLPKMPELKGKTFPDFVETTVD
TETIRYKDKNREKQRQKMLAELKTKEKIQFSKNHVKNEAWSKQKSKKERRQKRATKRSRR
EGSEIDEEDLEELLNDTRLLKKLKKGQISAEDFDKQIATEQKNKEKPAGPSHEDEDV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggataataccaccgatggaacgtgggacagtttacccgttaaactgaatgacgggatt
ttagaaacgctcaatgagctccaatttacacacatgacacctgtacagtctgcctgtatt
ccgctgtttatgagtaataaagatgttgctgctgaagcggtaacaggtagcggaaaaaca
cttgcgtttgtcattccaatcatagagctgctcctgaagcgagaggaaaagttgaagaag
atgcaggttggtgccctggtgatcactcccacaagagaattggcacttcagatcagtgag
gtgatgcagcagttcatccacaagttcccgcagtttacgcagattttactgatcggtggc
agtaatccaatagaggatgtggaaaagttcaaggatcaaggagccaacattgtaattgct
actccaggacgtctggaggatatgtttaagaggaaagcggacggtctggacttggcctgt
ttggtgaagagcctggaagtgctggttcttgatgaagccgataggcttcttgatatgggg
ttcgaggccagtctgaacgccatcttgggccacctgcctaagcagagacggaccggcttg
ttttcagccactcagacgcaggaactggagaaattggtgagagccggtctgaggaatccg
gtccgaatcgctgtaaaagagaagggtgtggctgcctctgccacccagaaaacaccctcc
agactctccaactactacaccatctgtaggtcagagaacaaattcaacaacctggtggca
tttctgaggcaacacaaacatgagaagaacctggtgttcttcagcacgtgtgcgtgtgtg
gaatatttcggtcgagcgcttgagaccctgataaagaaggctaccgtctgctgcatccac
ggcaagatgaaagacaaacgcaacaagatcttcgctgactttcgggccctgaaaagtggg
atcctggtgtgcacagatgtgatggccagaggcatcgacatacctgatgttgactgggtg
ctgcagtacgatcctccgagcagtgccagtgccttcgttcatcgatgtggacgtacagcg
cgcattggtaatcagggtaatgctctcgtctttctactccccatggaggaatcttacgtc
aattttttgtccattaaccagaaatgccctcttcagaagatgcctccgattaatgacgtg
gtggacgtgctgcctaaagtcaaggccatgtctctggctgatcgggccacatttgacaga
agcatgagagccttcgtctcatacgtgcaggcatatgcaaaacacgagtgtagtctcatc
ttcagagtcaaagatctggactttggctccttggcccgggcttttgccctcctccgcctg
ccaaagatgcctgaactcaaggggaaaacgttccctgattttgtggagacgacggtagac
acagaaaccatccgctacaaggacaagaacagagagaaacagcgacagaagatgctggca
gagctgaaaacaaaggaaaaaattcagttttccaagaaccacgtcaagaatgaagcctgg
tccaaacaaaagtccaagaaggaacgaagacaaaagagggcaacaaagaggagtcgtcgt
gagggctccgaaatagacgaggaggacctggaagagcttctaaatgacacccgcctcctt
aaaaagctgaagaagggacaaatcagcgccgaggactttgacaaacagatcgcaactgag
cagaagaataaagaaaaaccagccggaccgtcacacgaggacgaagatgtatga
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