Takifugu rubripes (torafugu): 101064579
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Entry
101064579 CDS
T02386
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101064579 (hmg20b)
03036 Chromosome and associated proteins [BR:
tru03036
]
101064579 (hmg20b)
Transcription factors [BR:
tru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
101064579 (hmg20b)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
101064579 (hmg20b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
Protamine_like
DUF4164
GIT_CC
Motif
Other DBs
NCBI-GeneID:
101064579
NCBI-ProteinID:
XP_011612975
UniProt:
H2V9Q4
LinkDB
All DBs
Position
20:6977093..6980476
Genome browser
AA seq
291 aa
AA seq
DB search
MGGIKQEQTDVAQQPRPSHSADQRADEPKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNE
RREHMRARYPDLPFPEITKRLGAEWTRLSQSDKQRYLDEAEREKMQYAQELKEYQQTEAY
HITSANIHDKRIKKEDANSIGGLESSFSKGSDLSNRFDMPIFTEEFLDQNKAREAELRRL
RKANIEFEEQNRVLQRHIKDMYNAKERLEAELGMDEKRTQALHQHLLTIKQTLVSSLSTV
PLPGTGETASLGNLDSYLSRLSGVLEGNPHKHRALVSQLCEVLAHLDSDKL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgggagggatcaaacaagagcagactgatgttgcacagcagcccagaccgtcacattca
gctgatcaacgagctgatgagccaaaaaagagaggctggccaaaggggaagaaaagaaag
aaggtgttgccaaatggccccaaggctccagtgactggatacgtccgctttctgaatgaa
cgtcgagagcacatgcgagctcgctaccctgacctacccttcccagaaatcaccaagaga
ctgggggccgagtggacacggttatcccagagtgataaacagcgttatctggatgaggcg
gagcgggagaagatgcagtatgcccaagaacttaaggaatatcagcagactgaggcttat
cacatcaccagtgctaacatacatgacaagaggattaaaaaagaagatgccaacagtatt
ggcggtttagagtcctctttttcaaagggctctgatctctcgaacagattcgatatgcca
atcttcacggaagagttcctggatcagaacaaagctcgagaggctgagttgcgccggctc
cgtaaggccaacattgagtttgaagagcagaacagagtgctccagaggcacattaaagac
atgtacaatgctaaagagaggctggaggctgaactgggaatggatgagaaacgaacccaa
gctcttcaccaacacttattgaccattaaacagactctggtcagcagtctgtcaacagtt
cccctaccaggtacgggcgagacagcgtctcttggaaacctggattcatatctgagtcgt
ctcagtggagtgctggagggaaacccacacaagcatcgtgcactggtcagccagctctgt
gaagttctcgcccatctggacagtgacaagttatga
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