KEGG   Takifugu rubripes (torafugu): 101064780
Entry
101064780         CDS       T02386                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 7 isoform X1
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101064780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tru03019]
    101064780
Messenger RNA biogenesis [BR:tru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101064780
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     101064780
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 101064780
NCBI-ProteinID: XP_003970132
Ensembl: ENSTRUG00000002353
UniProt: A0A3B5KFQ7
LinkDB
Position
14:2139824..2143573
AA seq 285 aa
MPAATVDHSQRICEVWANNLEEELKRIRHVIRKYNYIAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPSGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEDEGIETLFFAELLMTSGVVLCDGVKWLSFHSGYDFGYLIKILSNANLPEEEVD
FFEILRLYFPVIYDVKYLMKSCKSLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSAYVQNGTGNAYEEDANKQS
NT seq 858 nt   +upstreamnt  +downstreamnt
atgcccgctgctactgtggatcacagtcaaagaatatgtgaggtttgggccaacaaccta
gaggaggagctgaagaggatccggcatgtgatcagaaagtataactacatagcgatggac
actgagtttccaggagtggtagccagacccatcggagagttcaggagcaacgccgactat
cagtaccagttactgcgatgcaatgtggatttgctcaagataatccagctgggactcacc
tttatgaatgaacaaggggaatacccgtcagggacatcgacttggcagttcaattttaaa
tttaacctcactgaagatatgtacgcgcaggactccatcgagcttctcaccacttcaggg
attcagttcaagaagcacgaggacgaggggatcgagacgctcttcttcgcagagctgctg
atgacctctggagtggtgctctgcgacggcgtcaaatggttgtctttccacagcggctac
gactttggatacctgatcaaaatcctgtccaacgccaacctgcccgaggaggaggtggac
ttcttcgagatccttcgcctgtattttccagtcatttacgatgtcaagtacctcatgaag
agttgcaaaagcctgaagggcgggctgcaggaagtggcagagcagctggagctggagagg
atcggaccgcagcatcaagccggctcagactcgttactcacaggcatggcgttcttcaag
atgagagagatgttctttgaggaccacatcgacgatgccaagtactgcggtcacttgtac
gggctgggctccggctcggcgtacgtccagaacggaaccgggaacgcgtacgaagaagac
gccaacaagcagtcgtga

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