Takifugu rubripes (torafugu): 101064880
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Entry
101064880 CDS
T02386
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03030
DNA replication
tru03410
Base excision repair
tru03420
Nucleotide excision repair
tru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101064880 (rfc5)
03410 Base excision repair
101064880 (rfc5)
03420 Nucleotide excision repair
101064880 (rfc5)
03430 Mismatch repair
101064880 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tru03032
]
101064880 (rfc5)
03036 Chromosome and associated proteins [BR:
tru03036
]
101064880 (rfc5)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101064880 (rfc5)
DNA replication proteins [BR:
tru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101064880 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
101064880 (rfc5)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101064880 (rfc5)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101064880 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
101064880 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
ResIII
AAA_14
DEAD
AAA_24
AAA_16
DUF815
PhoH
nSTAND_NTPase5
TIP49
AAA_7
ATPase_2
AAA_19
AAA_5
AAA_30
nSTAND3
DNAX_ATPase_lid
AAA_2
Thioredoxin_6
Glyco_hydro_57
DUF4119
Motif
Other DBs
NCBI-GeneID:
101064880
NCBI-ProteinID:
XP_003975149
LinkDB
All DBs
Position
21:15846757..15849922
Genome browser
AA seq
335 aa
AA seq
DB search
MSSNSKTPLQKRNLPWVEKYRPQKLDDLISHRDILSTIQKFINEDKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVIQQESIDITPDGMKAIVTLSSGDMRRSLNILQSTSMAYEKVTEETAYNCTGHPLRSD
IANILDWALNKDFTTAYKQILELKTLKGLALQDILTEVHLLIHRVDFPPDIRIGLLIKLA
DVEHRLASGTDEKIQLSSMVAAFQAVRDFVASEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaacagtaaaacacccttacagaagcgaaacttaccctgggtagagaaatac
agaccgcagaaactcgacgatctgatctcccacagagacattctcagcaccattcagaag
tttatcaacgaggacaagctcccacatctcttgttctacggcccccccggaacagggaaa
acctccaccattctggcctgtgccagacagctgtacaaggacaaagagttcaactccatg
gttttagagttaaatgcatcagacgaccgaggtatcgacgtcgtacgtggtccaattttg
agttttgccagcaccaggaccattttcaagaagggcttcaagttggtgattctggacgag
gctgatgctatgacccaggatgcccagaatgcactgcggcgagtgatcgagaagtttaca
gaaaacactcgcttctgtctcatctgcaactacctgtccaagatcatcccagctctgcag
tcccggtgcaccaggttccgcttcggcccgctgtccccagatcagatgatcccccggctg
gagcatgtaatccagcaggaaagcattgacataactccagacggaatgaaggccattgtg
actttatcatcgggcgacatgagaaggtctctcaacatattgcagagcaccagcatggct
tacgagaaggtcacagaggaaacggcgtacaactgcacaggtcaccccctccgttcagat
atagccaacatcctggactgggccctcaacaaagatttcaccaccgcgtacaagcaaatc
ctggaactcaagactctgaaaggtttggccctgcaggacattctaactgaggttcacctg
ctgatacacagagttgactttcctccggatatccgaattggcctgctcatcaaactggct
gacgtggagcacagactggcctcagggaccgatgagaagatccagctcagctccatggtc
gcagccttccaggcggtgagagacttcgtggcgagcgaggcctcgtaa
DBGET
integrated database retrieval system
