Takifugu rubripes (torafugu): 101064967
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Entry
101064967 CDS
T02386
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101064967
Transcription factors [BR:
tru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101064967
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101064967
NCBI-ProteinID:
XP_029699279
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Position
1:complement(16621273..16683696)
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AA seq
298 aa
AA seq
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MYNMMMETDLHSPGPQTNTNTGQTGPNSGSKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKSLLKKDK
YSLAGGLLSGPSGGGGVGLGVGMSSSGVGQRLESPGGHGGSAGTGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHSHHHHTHNPQPMHRYDMTALQYSPISNSQS
YMNASPSGYGGISYTQHQGSSVSSSAAMGTLGSLVKSEPSLSVHHGHASVDLDHCRGL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatgatggaaactgacctccattccccaggcccccaaacgaacacgaac
acggggcaaacggggccgaatagcgggtccaaagcaaatcaggagcgagtgaagagaccg
atgaacgcgttcatggtgtggtctcggggacagcggagaaagatggcacaggagaatccc
aaaatgcacaactcggagatcagcaaaagactgggcgcagagtggaagctgatgtccgag
gctgaaaagcgccctttcatcgacgaggcgaagcggttgagagccatgcacatgaaggag
catccggattacaagtaccgtccaagacggaagaccaagtcgctgctgaaaaaggacaaa
tattcacttgccggtggactgctttctgggcccagtgggggcggtggagttggactggga
gtcggaatgagctcgtctggggtcggacagaggttagagagccccgggggtcacggaggc
tccgccggtacgggttacgcgcacatgaacggctgggcgaacggtgcgtactcggggcag
gtggctgcagccgcagcggcggctgcgatgatgcaggaggctcagctagcctacagccag
cacccggggagcggtgcgcaccaccaccactcacaccaccatcacacgcacaacccccag
ccaatgcaccgctacgacatgacagccctccagtacagccccatctcaaactctcagagc
tatatgaacgcttctccgtccggctacggcggaatcagctacacacagcaccagggctcc
agtgtgtcctcctcagctgccatggggacgttagggtcgctggtgaagtcagagccaagt
ctgagtgtccaccatggccatgcgtccgtggacctggatcactgcaggggcctgtga
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