Takifugu rubripes (torafugu): 101064989
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Entry
101064989 CDS
T02386
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04217
Necroptosis
tru04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
101064989
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101064989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101064989
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
101064989
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
101064989
Multi subunit Ring-finger type E3
LUBAC complex
101064989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
zf-RanBP
zf-RING_2
zf-RING_5
ubiquitin
YdfZ
Motif
Other DBs
NCBI-GeneID:
101064989
NCBI-ProteinID:
XP_011606100
Ensembl:
ENSTRUG00000006949
UniProt:
A0A674P3U5
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All DBs
Position
10:4063664..4076178
Genome browser
AA seq
710 aa
AA seq
DB search
MSLSSGGWTRTSPDFSADQAAAPSHHEASVSKHGCQTVLMSVPVSVCHSGIRPLCLPGAG
DESLRLQLSMDPGKSGDFRLSIQHSSGTGRTVTIAEFDLGTINYEVKSSKCHELSLVAPP
HERISFNFRCEQEAQGWATVLTSSLREAQRVGPQDNGPQDALDSVDTQNISSLQRTEETC
IELSHAIEAGDMQSASVLAATLARQHVTVQIQASARDYEDNEISLAVVVEDSSSSCCVTV
KVFPHMTTAALKQQVFLEYGFHPRVQRWVIGQCLCADQRSLASYGVHQDGDTAFLYLLSA
RHARLTQQVLQQDQESALLVNPPSLFASTPPLTTTSTNGSSSLDRRSYCTLPSRLHTSCN
IGGPERGNISDIRDLINIQMPQLQEALAPKKASAQGWSCPSCTYINKPTRPGCEICSTNR
PESYVIPGGYRPDALELRRIQQEKEAIRQYQQAREEERSKNFARLVMLDSQDLLPNPEPV
ECRICYMDLQRGDGVLLRECLHCFCKECLRSVIMLSEEPEVSCPYRDETYSCSCFLQERE
IRALVPAEDYERWLQRGLSVAESRCEGSYHCATPDCLGWCVYEDTVNVFHCPVCKKHNCL
ICKSIHEGMNCKQYQDDLVARAINDSAARRTTNLLKTLVQSGEAMHCPQCGIIVQKRDGC
DWLRCTVCHTEICWVTRGPRWGPRGPGDTSGGCRCNVNDQKCHPKCQNCH
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgagttcgggcggttggacacgcacttctccagacttcagcgcggatcaggcc
gccgccccgtcacatcatgaggcctcggtatctaaacacggctgtcagactgtcctcatg
tcggtgccggtgtcggtgtgccactccgggattcggcctctctgtctacccggagcaggc
gacgaatcgctgcgcctgcagctcagcatggaccctgggaagtccggggatttccggctt
tcgatccagcacagcagcgggactggccggactgtgaccattgccgagtttgatttgggg
acgatcaactacgaggtgaaatcatcaaagtgtcatgagctgagtttggtggcgcctcca
cacgagcgcatcagcttcaacttccgctgtgagcaggaagcccaggggtgggcaacggtg
ctgacatcatccctgagagaggcacagagagttggccctcaagataatggtccccaggat
gctctggactctgttgatactcagaacatttcatctttgcaaagaacagaggaaacgtgt
atagaactcagccacgctatagaagcaggtgatatgcagtctgcttccgtccttgctgcc
acactagctcgacaacacgtcactgtccagattcaggcctctgccagagactatgaagat
aatgaaatcagtctggcagttgtagtcgaggattcttcgtcatcctgttgtgtcactgtg
aaggtttttccacacatgaccactgcagcactgaagcagcaggtgtttctggagtatggc
tttcaccctcgggtacagcgctgggtgatcggccagtgcctgtgcgctgaccagcgctcc
ctcgcctcatacggagttcatcaggatggtgacactgcctttctgtacctactttcagcc
cgtcatgctcgcttgactcagcaggttctccaacaagaccaggagagcgcccttcttgtc
aatcccccatctttgtttgcatctactccccccctcactactacctcaacaaatggatcc
tcatctctggacaggaggtcttactgtaccctaccttccagactccatactagctgcaat
attggtgggccagaaagaggaaacatcagtgatatcagagatcttatcaacatacagatg
cctcagctccaagaagcacttgctcccaaaaaagcctctgcccagggttggtcgtgcccg
tcttgcacttacattaataaaccaactcgtcccggatgcgagatctgcagcacaaaccgt
ccagagagttacgtcatcccgggaggataccgacccgatgcactagagctcagacgaatc
cagcaggaaaaggaagctataaggcagtaccaacaggcacgggaagaggagcgcagcaaa
aactttgcccggctggtgatgttggacagccaggacctgcttcctaaccccgagcctgtg
gagtgcaggatctgctacatggatctgcagcgtggagacggggtcctgctgagggagtgc
ctccactgtttctgcaaagagtgcttacgttcagtcattatgctgagtgaagagccagag
gtatcgtgtccctacagagatgaaacctactcctgctcctgctttttgcaggaaagagag
atcagagctttggtgccggcggaggactacgagcgatggctgcagagaggtctttctgta
gcagagtcacgctgtgagggcagctaccactgtgccacccctgactgtctgggctggtgt
gtgtacgaggataccgtcaatgtcttccactgccccgtctgcaagaaacacaactgtctt
atttgtaaatctatccatgagggaatgaactgtaagcaataccaggatgacctcgtcgct
cgtgctataaatgactctgctgccaggaggacaacgaacctcctcaagacgctggtgcag
tcaggggaagctatgcactgtcctcagtgtggcatcatcgtgcagaagagagatggttgt
gactggctacgctgtactgtttgtcacactgaaatctgctgggtgaccagaggaccacgg
tggggtccgaggggtcctggagacaccagtggaggatgccgctgcaatgtgaatgatcag
aaatgtcaccctaaatgccaaaactgccactga
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