Takifugu rubripes (torafugu): 101065079
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Entry
101065079 CDS
T02386
Name
(RefSeq) C-myc promoter-binding protein-like isoform X4
KO
K20163
DENN domain-containing protein 4
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101065079
Membrane trafficking [BR:
tru04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
101065079
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
101065079
NCBI-ProteinID:
XP_003969811
LinkDB
All DBs
Position
13:12142833..12172374
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AA seq
1971 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPITDVAVVIRSLGEEVP
PGYCGIEETPSGHSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLYEWKERLKQGCHLI
QTTPSGRPANISGNSSQRIYITYRRAAESQPHSALAVTDICIIIPSKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPQSVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYETFPPECLNDQQRSQLSLPNPDPCR
SSSSCSASTAADSNSAATQCSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVQPI
EKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLENLGPENA
VTMLVLAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCP
FIVGVDSRYFDLYDPPPDVTCVDLDTNTIFHNEDKRALTWKILPKKACKNLMNVLSNLHQ
QLLHGQNGPDGLLELNICDTSELSCGKSLHTLELEIQEAFLRFMAAILKGYRSFLRPITQ
APSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFD
DCVDKVDGDRPEETRLIEIDESQRSEHTVFITPPELPPLPEGEEYPLCYRYDGFPVLSLD
LFDPVEGLQTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKKYSSIPQLWSKCLLRH
CYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVCYRVLMQLCGQYGQPV
LAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWMKLRNVVLGVAQFKRA
LRRHAPLTQSPLSDGSDLDAVSHGSLDSSADTNATVEQGPFAANPAKVDPTDDRSSTGDQ
SDLGYNSLSKEEVRRGEPGPQESIQDKDDKKESDCSSLSETESSRGSKDCLPQLDADASS
SFKPRGIVRSSFPYDDSSCRPKSSASAGHVAGLLFTSSLDEIGEVRTSSLLRRHKSALEE
VVGGSSNAAYKWQGLRGRRLSDDPVGCSAATVLGLGLTQGETDPGKIAGHLGADVKILSD
TSFSKKKKPRSLCLGGSERAVVNAGASRFHGHREEEEETEGQDSSDEDRANPEAIFDLED
LDLEKPNSAVGSSLQKTNTSRRKLMEHSGGYSNVENAKGAVKRTDIETGYDPLSLLAAEQ
QTEAQCSEDNDGGAPSTRRHLAREIELYMNHMGSPLSSRTPSLDLQDPSSPPLLHPSSIS
APRRASLPDSSPHRTAGVPRSRTFHPQSPSQTPSRQRLWSSPSCRSSSTTATPSPSPRPS
PNRERDNRMGLVSPSPSSSSFTLDNLLTPSLDVFKTSMFSAGKGVAEKASRWYSRLATYT
TPTKDGHSDRLSVSSLSVGDLDCPSALGEGGYREQEGAAVSPQKNGPRRSPRRSPLHKLE
NPTQCSSFGRPTSLLPGGVLTPPGSPLPDKSDLSSSRYTSNTSIFNNYGMELLISSCSRC
KTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDLRGPGRLFLKGSPSVD
EAVTSSCSASTGLDTGTSSLSTPCPTTAVSPPSPFVALKERSGCGRFPSSRVPSINIPTG
CRQGALFPDGSMARSVSVFSPLEETLRNNNCVPTSGSLPSRLDEAADPLSMDWRLHNPEP
VTVPYLSPLVLWKELESLLENEGDAVITEADVVDHHPIIYWNLVWYFRRLDLPSNLPGLI
LTSDHCNRDSQIPRHWMSEDSKHVLIQILWDNLKLHQDPVQPLYILWNTYNVGYPLSRPV
LEEEQPLSEELLQNVVKSIQRNDLSRPLAQLLQLLGHTLGVKRQRSVYRDVLFLSLVALG
KDNIDIDAFDREYKLAYDRLLPGLVKLTHNCDRPPSTGVMECRRTFGEPYL
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacaaaggccctcgtgtagccgactactttgtggtggccgggctgacggac
ccatccaaaccgctggaccaggagatccactttgatgatgtctgccacaagacggctaaa
ccaaaggcgcccatcaccgacgtggcggtggtgatccgctcgttgggtgaggaggtgcca
ccaggttactgcggcatcgaagagaccccgagcgggcactcggctgacctgaacaacggt
ggcctcatggcgccacagatcttcctgtgctacagaaggggtcgtgacaagccgccactg
actgacttgggagtgctgtatgaatggaaggaacggctgaagcagggctgtcatctgatc
cagaccaccccctctggacgcccagccaacatcagcggcaattcctcccagcgcatctac
atcacctaccgcagggcagctgagagccagccccactctgccctcgccgtcaccgacatc
tgcattatcatcccgagcaaaggggagacgcccccacacacattctgcaaggtggacaag
aatctcaacagcagcatgtggggttcctctgtctatctgtgttacaagaagtctgtggcc
aaaaccaacacaatagcctacaaagcaggtttattcagcagatacccagaggaggattac
gagtcgtttcccctaccacagtctgttcccctcttctgccttcccatgggggccacaatt
gaatgctggccagcaaacaccaaatactccctccctgtattttctacatttgtcctcact
ggagcctctggagagaaggtctacggtgccgccattcagttctacgagactttcccgcca
gagtgcctgaacgatcagcagcggtcccagttgagccttccgaacccggacccctgcaga
tcctcgtcctcctgttccgcgtcaacagcagccgacagcaacagcgccgccacccagtgc
tccgtctacaccaacaaatgcatctgcctcctctcccactggccgttctttgacgcgttt
cgcaagtttctcacattcctctatcgctactccatctccggccctcacgtgcaacctata
gagaagcatatctctcattttatgcacaaagtccccttcccctcctctcagcgtcctcgt
atcctagttcagctttctcctcacgacagtttgatgttgagccagcccgtttcctctcca
ttaccgctcagcggtggtcgattctcaacgctgctagagaacctcggaccagagaacgcc
gtcaccatgctggtgctcgccgtcaccgaacacaagatcctggtccactcgttgcgacct
gccgtgctgaccagcgtcaccgaggcactcgtgtccatgattttcccgttccactggccg
tgcccgtatattcctctctgcccgctggccttggctgatgttttgagtgccccctgcccg
ttcatcgtgggagttgactcccgctactttgatctgtacgaccccccgcctgatgtgacc
tgtgttgacctggacaccaacaccatcttccataatgaagataagcgagccctcacatgg
aagatcctgccaaagaaagcctgtaaaaacctcatgaatgtgctgagcaacctccaccag
cagctgcttcatggtcagaacgggcctgacggactgctggagctcaacatctgtgacacg
tcagagctgagctgtgggaagagtcttcacacactggagctggagatccaggaggccttc
ctgcgcttcatggccgccatcttgaaagggtaccgatcgttcttacgacccatcactcag
gccccctctgaaaaagccactgacgccagctctctttttgatttgcaaggattcctgaag
agccgtgatcgctcacaccagaagttctactccctgatgaccaaaactcagatgttcatc
cgctttatcgaggagtgctccttcgtcagcgacaaagacgccagcctggctttctttgac
gactgtgtggacaaagtggacggtgatcggccggaggaaacccgcctgatagaaattgat
gagtcccagcgcagcgagcacaccgtcttcatcacacctccagagctgcctcctctgcct
gagggggaggaatatcctctctgctacagatatgatgggtttccggttttaagtcttgac
ctgtttgaccctgtggaaggtctgcagaccccttcctcacgcctcgctgccaggcacagc
tgccccaccagccccgcccccatgtttagacgcaccaagcaggagatcaaatcagcccag
aagatcgcaaagaagtactcctccataccccagctatggtccaagtgcctgctccgccac
tgttacggcctgtggttcatctgtctccctgcgtacgtcaaagtgtgccactccaaggtg
cgggcgctccgcaccgcctatgacgtcctcaggaaaatgcaggcgaagaaactgcagccc
cctgatgaggtgtgttaccgggtgctgatgcagctgtgtggacaatatggccaacctgtc
ctggctgtcagagtcctgttcgagatgaagaaggctggagttcaccccaatgccatcacg
tacggctactataacaaggcagtgttggagagcacatggccctcaagcaccagaggtgga
tacttcctgtggatgaagctgagaaacgtggttttgggtgtggctcagttcaaacgggcg
cttcggcgacacgctccgctcacccagagcccgctgtcagatggcagcgacctggacgcc
gtgagtcacggcagcctggacagctctgccgacactaacgcgacggtcgagcagggcccc
ttcgccgccaaccccgccaaagtagaccccactgatgatagatctagcacaggagatcag
tcagatctgggttacaactcactttccaaagaggaggtccggagaggagagcccggacct
caggagtccatccaggacaaagacgacaagaaggagagcgactgcagctccctgtcggaa
acagagagcagcagaggaagtaaagactgcctccctcagctggatgcggacgccagctcg
tctttcaaacctcggggcatcgtccgcagcagcttcccgtacgacgactcttcctgcaga
cccaagagctccgccagcgcaggacatgtggcgggtcttctcttcacgtcctccctggat
gagatcggcgaggtccgaaccagctctctgctcaggagacacaagagcgccctggaggag
gtggtgggaggcagcagtaacgcagcatacaagtggcagggtttaaggggccgacggctg
agcgacgacccggtaggctgcagcgccgccacggttttgggactgggtttgacccaaggt
gaaactgacccggggaagatcgcaggacacctgggagcggatgtgaagattctgtctgac
actagcttcagtaagaaaaagaaacctcggtcgttgtgtctgggtgggtcagagagggca
gtggtgaacgcgggagcttccagatttcatggccaccgcgaggaggaagaggagaccgag
ggtcaggactcgagtgatgaggacagagctaatccagaagccattttcgatctggaggat
ctggatttagagaaaccgaactcagcggttggcagcagtttgcagaaaaccaacacatct
cgtaggaaacttatggaacacagtggtggctatagcaacgtcgagaacgccaaaggagcc
gtgaagcgcacagacattgagacaggctacgatcctctgtctctgctggcagctgaacag
caaacagaggctcagtgctcagaggacaacgatggtggcgcaccgagcacccgcagacac
ctggccagggagatagaactctacatgaaccacatgggcagccctcttagcagccgcaca
cccagtctggacttgcaggacccttccagcccccccctgctccatccctcctccatctct
gcccctcgccgggccagcctgcccgacagctccccccacaggactgccggagtaccgcgt
tcccgcaccttccacccacaatcgccttcacaaacaccgtcacgtcaacgcctgtggtct
tcgccttcctgtcgcagctccagcacaaccgccacccccagccccagcccacgacccagt
ccaaacagggagagggacaacaggatgggcctggtgtctccatcaccctcatcctcctcg
ttcactctggacaatctgctcacaccctcgcttgacgtgttcaagacaagtatgttctct
gcaggaaagggcgtggcggagaaggcgagccgctggtactctcgcctggcaacgtacacc
acaccgaccaaggacggccacagcgaccgcctgagcgtgtcttccctcagtgttggagac
ctagactgtccctctgcactgggtgaaggcggttacagagaacaagagggcgctgcagtc
tcacctcagaagaacggcccccgccggagccccaggcgcagccccctccacaaactggaa
aacccaactcaatgctccagctttgggagacccacatctctgcttcccggtggcgtcctc
acacctcctggctctcctctgcctgataaatcggacctcagctcatcacgctacaccagc
aacaccagcatcttcaacaactacggcatggagctgctgatctccagctgttcccgctgc
aagacatgtgactgcctggtgtatgatgaggaaatcatggctggctggacggctgacgat
tccaacctgaacacaacctgtccgttctgtggaaacccctttctgcccttcctcaacgtg
gagatcagagacctgcgaggtcccggccggcttttcctgaaaggaagcccatccgtggat
gaggctgtgacgtcgtcgtgctcggcctccacaggattggacacggggacgtcctccctg
tccacgccgtgtccaacgacagccgtctccccgccatccccttttgtagctctgaaggag
cgttcaggatgtgggaggtttccatccagccgagttccgagtatcaacatccccacaggc
tgtcggcagggggcgctgttcccggacgggtccatggctcgcagcgtcagcgtcttcagc
cccctggaggaaacgttgcgaaacaacaactgtgttccgacgtcaggcagtctgcccagt
cgcctggacgaagccgctgacccactcagtatggactggaggctccacaaccctgagccg
gtgacggttccgtacctgagtccgctggttctgtggaaggagctggagagtctgctggag
aatgagggcgatgctgtcatcacggaggctgacgtggtggaccaccatcccatcatctac
tggaacctggtctggtacttcagacgactggacctgcccagcaacctgcccggtctcatc
ctcacctcagaccactgcaacagggactcccagattcctcgtcactggatgtccgaggac
agcaaacacgtgttgatccagattctgtgggacaacctgaagctgcaccaggacccggtc
cagcctctctacatcctctggaacacctacaacgtgggctaccctctgtcccggcccgtt
ctggaggaggagcagccgctcagcgaggagctgctgcagaacgtggtgaagagcatccag
aggaacgacctgagtcgcccgctggcgcagctgctgcagctgctgggtcacaccctcggg
gtcaaacggcaaaggagcgtctacagggacgtcctcttcctctccctggtggctctgggt
aaagacaacatcgacattgacgccttcgatcgtgaatacaagctggcgtacgaccgcctc
ctgccgggcctggtgaagctgacccataactgtgaccgtcctcccagcacgggggtgatg
gagtgccggaggacgttcggggagccttacctgtga
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